Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 IGKV2D-38-201ENST00000518423 240 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC138832.1-201ENST00000522871 556 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AP004609.2-201ENST00000532177 190 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 VDAC2P2-201ENST00000544463 901 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC027216.1-201ENST00000577726 685 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC019257.2-201ENST00000605539 497 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC006924.1-201ENST00000610750 559 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC096708.4-201ENST00000620563 552 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 GTF2IP4-201ENST00000453092 2054 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AL161756.3-201ENST00000641216 2071 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 ZNF969P-201ENST00000510345 2341 ntBASIC5.36□□□□□ -1.55
HLA-DQB1P01920 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB1P01920 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 RPS2P45-201ENST00000469997 2057 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC011416.1-201ENST00000514947 1732 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC092701.1-201ENST00000623627 1551 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL353743.3-201ENST00000442109 1468 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 RNA5SP152-201ENST00000365184 110 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL445238.1-204ENST00000400311 463 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC245096.1-201ENST00000413104 546 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 PCMTD1P3-201ENST00000451824 472 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC073594.1-201ENST00000462065 364 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 RPL21P42-201ENST00000488408 464 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 RN7SKP242-201ENST00000515967 289 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 NF1P12-201ENST00000549593 583 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC020916.2-201ENST00000591242 360 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL589863.1-201ENST00000595383 631 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC006115.2-201ENST00000596823 202 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC015712.7-201ENST00000615211 635 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC007347.2-201ENST00000623044 180 ntBASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DQB1P01920 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DQB1P01920 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms