Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 AL021877.2-201ENST00000624442 10684 ntBASIC7.54□□□□□ -1.2
MBD4O95243 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 GUCY1B2-204ENST00000531898 1979 ntBASIC7.54□□□□□ -1.2
MBD4O95243 RN7SKP237-201ENST00000364663 301 ntBASIC7.54□□□□□ -1.2
MBD4O95243 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.54□□□□□ -1.2
MBD4O95243 VN1R12P-201ENST00000403778 876 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.54□□□□□ -1.2
MBD4O95243 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.54□□□□□ -1.2
MBD4O95243 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.54□□□□□ -1.2
MBD4O95243 AL354707.3-201ENST00000427308 331 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.54□□□□□ -1.2
MBD4O95243 RPSAP40-201ENST00000442343 891 ntBASIC7.54□□□□□ -1.2
MBD4O95243 MTCO3P17-201ENST00000443775 513 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AP002453.1-201ENST00000492327 668 ntBASIC7.54□□□□□ -1.2
MBD4O95243 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 AC108103.1-201ENST00000511286 446 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.54□□□□□ -1.2
MBD4O95243 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.54□□□□□ -1.2
MBD4O95243 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.54□□□□□ -1.2
MBD4O95243 AL845552.1-201ENST00000556820 323 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 MIR4271-201ENST00000582451 67 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AL591167.1-201ENST00000607321 456 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AC022106.1-201ENST00000612834 766 ntBASIC7.54□□□□□ -1.2
MBD4O95243 AC022960.2-201ENST00000616300 666 ntBASIC7.54□□□□□ -1.2
MBD4O95243 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
MBD4O95243 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.54□□□□□ -1.2
MBD4O95243 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.54□□□□□ -1.2
MBD4O95243 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.54□□□□□ -1.2
MBD4O95243 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MBD4O95243 EIF3EP1-201ENST00000433978 1316 ntBASIC7.53□□□□□ -1.2
MBD4O95243 BIN2P1-201ENST00000504996 1530 ntBASIC7.53□□□□□ -1.2
MBD4O95243 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 RNA5SP478-201ENST00000364657 115 ntBASIC7.53□□□□□ -1.2
MBD4O95243 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MBD4O95243 OOSP1-201ENST00000398992 1270 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 RPL7AP14-201ENST00000424041 802 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.53□□□□□ -1.2
MBD4O95243 AL451136.1-201ENST00000435399 325 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.53□□□□□ -1.2
MBD4O95243 AC010240.2-201ENST00000445363 1205 ntBASIC7.53□□□□□ -1.2
MBD4O95243 HMGB1P7-201ENST00000450921 612 ntBASIC7.53□□□□□ -1.2
MBD4O95243 HIGD1AP16-201ENST00000450986 258 ntBASIC7.53□□□□□ -1.2
MBD4O95243 RPL34P33-201ENST00000486062 334 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.53□□□□□ -1.2
MBD4O95243 AC253576.1-201ENST00000511645 1156 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AP004607.6-201ENST00000525033 1202 ntBASIC7.53□□□□□ -1.2
MBD4O95243 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.53□□□□□ -1.2
MBD4O95243 AC006512.2-201ENST00000543250 486 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.53□□□□□ -1.2
MBD4O95243 AC026826.3-201ENST00000561747 158 ntBASIC7.53□□□□□ -1.2
MBD4O95243 MRPS21P8-201ENST00000569196 235 ntBASIC7.53□□□□□ -1.2
MBD4O95243 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 MIR4701-201ENST00000583094 63 ntBASIC7.53□□□□□ -1.2
MBD4O95243 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.53□□□□□ -1.2
MBD4O95243 AC010998.3-201ENST00000613871 631 ntBASIC7.53□□□□□ -1.2
MBD4O95243 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 Z93929.1-201ENST00000418200 1475 ntBASIC7.53□□□□□ -1.2
MBD4O95243 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.53□□□□□ -1.2
MBD4O95243 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.53□□□□□ -1.2
MBD4O95243 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MBD4O95243 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.52□□□□□ -1.2
MBD4O95243 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.52□□□□□ -1.2
MBD4O95243 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
MBD4O95243 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
MBD4O95243 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms