Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 SNORD16-201ENST00000362803 99 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 RNU6-670P-201ENST00000364312 104 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 DHFRP2-201ENST00000414224 547 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AL359885.1-201ENST00000415786 903 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 VN1R20P-201ENST00000425215 966 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AL390879.2-203ENST00000426943 1121 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 CLNS1AP1-201ENST00000435954 682 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 H3F3AP5-201ENST00000475267 429 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
ZIC3O60481 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 RPS27P20-201ENST00000492051 246 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.8□□□□□ -1.48
ZIC3O60481 RN7SKP98-201ENST00000517070 156 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 RN7SKP183-201ENST00000517169 324 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC244034.2-201ENST00000562504 509 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 NPM1P45-201ENST00000583151 559 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AC144521.1-201ENST00000607148 956 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AC005828.7-201ENST00000607331 556 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AL359091.2-201ENST00000609303 556 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AC096586.2-201ENST00000610260 441 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 MIR6780B-201ENST00000610307 79 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 WBP1LP8-201ENST00000617401 327 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 AL132640.3-201ENST00000630473 177 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 AL596275.2-207ENST00000641188 675 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 AC068733.2-201ENST00000605434 1418 ntBASIC5.8□□□□□ -1.48
ZIC3O60481 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.8□□□□□ -1.48
ZIC3O60481 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ZIC3O60481 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ZIC3O60481 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZIC3O60481 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
ZIC3O60481 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 AC061975.7-201ENST00000592016 2692 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 CASC19-246ENST00000641625 1606 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ZIC3O60481 RPL11P4-201ENST00000332269 436 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 Y_RNA.62-201ENST00000362840 99 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 AL157702.1-201ENST00000398764 426 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC013268.2-201ENST00000420753 337 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 FABP5P1-201ENST00000423401 411 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 CR848007.2-201ENST00000424918 787 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 ZFAND6P1-201ENST00000434138 605 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 FABP5P2-201ENST00000439042 408 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 MGAT2P1-201ENST00000449718 797 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.79□□□□□ -1.48
ZIC3O60481 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 CCNJP2-201ENST00000457810 1163 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 RN7SL643P-201ENST00000471845 291 ntBASIC5.79□□□□□ -1.48
ZIC3O60481 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.79□□□□□ -1.48
ZIC3O60481 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.79□□□□□ -1.48
ZIC3O60481 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZIC3O60481 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.79□□□□□ -1.48
ZIC3O60481 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms