Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 MTCYBP17-201ENST00000503579 789 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 HMGB3P13-201ENST00000511263 607 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 RNU6-507P-201ENST00000516045 100 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 MTCO2P15-201ENST00000532655 656 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 NDFIP1P1-201ENST00000543144 525 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 BMS1P15-201ENST00000554269 1141 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC079610.2-201ENST00000604818 690 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 AC099654.14-201ENST00000638599 341 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 ATP5A1P10-201ENST00000622403 1603 ntBASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PDZRN3Q9UPQ7 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 KYNUP1-201ENST00000466683 1406 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC090983.1-201ENST00000623426 3897 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC023886.2-201ENST00000321285 411 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC090114.1-201ENST00000393266 448 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CYP4F34P-201ENST00000425951 481 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC023271.1-201ENST00000445936 1090 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC008629.3-201ENST00000505786 586 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC108120.1-201ENST00000506543 991 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC095059.2-201ENST00000510601 933 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 OR4A42P-201ENST00000531397 938 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC126323.4-201ENST00000566935 234 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AL117336.2-201ENST00000602435 335 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 ANKRD20A19P-203ENST00000602724 295 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 COX6CP16-201ENST00000603667 216 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AL022238.3-201ENST00000609279 443 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AL391903.2-201ENST00000614532 247 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC022079.2-201ENST00000619739 566 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC111188.2-201ENST00000529697 1387 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 AC007923.2-201ENST00000584218 1591 ntBASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PDZRN3Q9UPQ7 MFSD8-218ENST00000641186 4448 ntBASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PDZRN3Q9UPQ7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms