Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 APOOP1-201ENST00000604695 592 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AC008966.2-201ENST00000606157 453 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 PRYP3-202ENST00000607210 444 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 PTCHD3P1-201ENST00000612350 537 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AC097641.3-201ENST00000613523 464 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AL359757.2-201ENST00000624309 274 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AC004801.7-201ENST00000624535 2973 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AC022182.3-201ENST00000529239 2167 ntBASIC8.61□□□□□ -1.03
LHX6Q9UPM6 AGK-203ENST00000473247 1550 ntTSL 5 BASIC8.61□□□□□ -1.03
LHX6Q9UPM6 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 CDR1-202ENST00000625883 1485 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RNA5SP263-201ENST00000363376 128 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 Y_RNA.291-201ENST00000364886 113 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RNU4-20P-201ENST00000365601 151 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SSX6-201ENST00000376932 562 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 GAPDHP42-201ENST00000406848 981 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AL589763.1-201ENST00000412257 791 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC023141.1-201ENST00000419418 379 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AL589872.1-201ENST00000426602 288 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SKP1P3-201ENST00000429280 487 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RPL7P52-201ENST00000449200 742 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 NPM1P39-201ENST00000449818 867 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 RN7SL496P-201ENST00000470372 290 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC026254.1-201ENST00000479473 431 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC122714.1-201ENST00000502510 459 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC006390.1-201ENST00000508068 283 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 NPM1P41-201ENST00000512920 831 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 PGAM1P8-201ENST00000526979 453 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AP000827.1-201ENST00000527814 258 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AP002812.4-201ENST00000532139 286 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 PMM2-213ENST00000566983 907 ntTSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC006557.4-201ENST00000585516 830 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC098479.1-201ENST00000609225 154 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC007336.2-201ENST00000611626 557 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC143336.1-201ENST00000614164 836 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC018558.4-201ENST00000622153 281 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AC011815.3-201ENST00000624194 473 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 TRIM51-202ENST00000449290 1629 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC8.6□□□□□ -1.03
LHX6Q9UPM6 AL353583.1-201ENST00000624195 1855 ntBASIC8.6□□□□□ -1.03
LHX6Q9UPM6 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LHX6Q9UPM6 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LHX6Q9UPM6 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms