Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC073593.1-201ENST00000624500 411 ntBASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 AC125238.2-201ENST00000430003 1440 ntBASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 CASC19-228ENST00000641414 1684 ntBASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SYNPO2Q9UMS6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 OR51C1P-202ENST00000641159 1444 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 RNU1-65P-201ENST00000363919 148 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 YWHAZP4-201ENST00000392459 708 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 VN1R12P-201ENST00000403778 876 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 COX4I1P2-201ENST00000447446 547 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC063943.2-201ENST00000495697 534 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 RNA5SP418-201ENST00000515951 117 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 IGHV4-55-201ENST00000520889 368 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC234775.3-201ENST00000564612 656 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AL359704.2-201ENST00000604335 521 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC139493.1-201ENST00000604368 397 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AL713998.2-201ENST00000604538 1198 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AL445647.2-201ENST00000615170 130 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC005839.1-201ENST00000624148 3213 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC010624.4-201ENST00000597606 1351 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 CASC19-246ENST00000641625 1606 ntBASIC7.56□□□□□ -1.2
SYNPO2Q9UMS6 AL353743.3-201ENST00000442109 1468 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AP004289.1-201ENST00000436307 2205 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC007993.1-201ENST00000621298 2430 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 RN7SKP237-201ENST00000364663 301 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL023284.3-201ENST00000407767 334 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 GAPDHP59-201ENST00000435908 267 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 PMS2P9-201ENST00000441237 515 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 POU5F1P5-201ENST00000445059 658 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 RN7SL170P-201ENST00000487098 295 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC104629.1-201ENST00000494226 508 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 HSD3BP3-201ENST00000514706 994 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC009729.1-201ENST00000548873 1133 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC009268.1-201ENST00000561352 1203 ntBASIC7.55□□□□□ -1.2
SYNPO2Q9UMS6 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms