Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL139415.1-201ENST00000424862 352 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC108479.1-201ENST00000431142 427 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC003989.1-201ENST00000434569 565 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC091874.2-201ENST00000505889 720 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC084121.1-201ENST00000533882 835 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC004232.2-201ENST00000574245 821 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 SMIM12P1-201ENST00000603004 274 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC073592.6-201ENST00000624271 415 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC074141.1-201ENST00000588129 2995 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC062022.1-201ENST00000451026 1684 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC010329.1-201ENST00000593903 8328 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC006213.6-201ENST00000623722 4179 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 FUNDC2P3-201ENST00000334716 533 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AL157702.1-201ENST00000398764 426 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 RPSAP40-201ENST00000442343 891 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 ZNF519P4-201ENST00000514008 125 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 HSD3BP3-201ENST00000514706 994 ntBASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CLIP2Q9UDT6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 HMGN1P17-201ENST00000513734 295 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 RNA5SP206-201ENST00000516703 121 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AL845552.1-201ENST00000556820 323 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 MIR4502-201ENST00000580432 81 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AC134669.1-201ENST00000581275 672 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AL078623.1-201ENST00000602702 907 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 RPSAP75-201ENST00000605848 301 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 MIR6811-201ENST00000620409 58 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AC018659.2-201ENST00000624690 715 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AC009831.5-201ENST00000624000 3189 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 AC006511.3-201ENST00000624929 1783 ntBASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.53□□□□□ -1.2
CLIP2Q9UDT6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.52□□□□□ -1.2
CLIP2Q9UDT6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.52□□□□□ -1.2
CLIP2Q9UDT6 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.52□□□□□ -1.2
CLIP2Q9UDT6 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
CLIP2Q9UDT6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 SNORA70H-201ENST00000383910 135 ntBASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 SNORA70J-201ENST00000384182 135 ntBASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 AL035422.1-201ENST00000414193 397 ntBASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 AL157884.1-201ENST00000424561 454 ntBASIC7.52□□□□□ -1.21
CLIP2Q9UDT6 EMC3-AS1-205ENST00000438698 534 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms