Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC005332.4-201ENST00000592752 579 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 uc_338.31-201ENST00000615595 186 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
CCDC88CQ9P219 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 FAM32BP-201ENST00000344033 333 ntBASIC6.02□□□□□ -1.45
CCDC88CQ9P219 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC009963.3-201ENST00000458090 486 ntBASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC079414.3-201ENST00000612986 1090 ntBASIC6.02□□□□□ -1.45
CCDC88CQ9P219 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 MAPK10-270ENST00000641102 3538 ntBASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AKAP17BP-201ENST00000431706 2719 ntBASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC88CQ9P219 AC104966.1-201ENST00000467010 1464 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 RAB5CP1-201ENST00000395972 580 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 RBBP4P5-201ENST00000398583 1266 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 CYP4F30P-202ENST00000420048 405 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC099782.1-201ENST00000425889 474 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 RPS29P14-201ENST00000431518 171 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 H3F3AP5-201ENST00000475267 429 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC002310.3-201ENST00000569728 723 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AL135999.3-201ENST00000610501 812 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 MTND2P12-201ENST00000417560 1252 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC022206.1-201ENST00000495947 347 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 SNX18P25-201ENST00000510539 758 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC253576.1-201ENST00000511645 1156 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 COX6B1P4-201ENST00000519826 484 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 OR6M2P-201ENST00000529831 871 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 MIR4310-201ENST00000582950 57 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AP005136.2-201ENST00000583253 1049 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 MIR6811-201ENST00000620409 58 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC024884.1-201ENST00000620583 399 ntBASIC6.01□□□□□ -1.45
CCDC88CQ9P219 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC88CQ9P219 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC88CQ9P219 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC88CQ9P219 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6□□□□□ -1.45
CCDC88CQ9P219 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms