Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP001052.1-201ENST00000626421 99 ntBASIC7.22□□□□□ -1.25
COL20A1Q9P218 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.22□□□□□ -1.25
COL20A1Q9P218 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL20A1Q9P218 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 AL354854.1-201ENST00000455940 1363 ntBASIC7.21□□□□□ -1.25
COL20A1Q9P218 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.21□□□□□ -1.25
COL20A1Q9P218 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.21□□□□□ -1.25
COL20A1Q9P218 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 CUBNP3-201ENST00000457461 1784 ntBASIC7.21□□□□□ -1.25
COL20A1Q9P218 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL20A1Q9P218 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 RNU6-819P-201ENST00000364116 107 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 U3.43-201ENST00000410734 213 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 DNAJA1P5-201ENST00000440278 943 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 RPS10P18-201ENST00000442662 495 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 OR52I1-201ENST00000450052 1050 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 MTCYBP14-201ENST00000457471 715 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 NDUFA5P5-201ENST00000468361 342 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 DEFB109A-201ENST00000482450 265 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 RPL34P33-201ENST00000486062 334 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 IGKV1D-22-201ENST00000518953 324 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC130364.2-201ENST00000528639 604 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 MIR4310-201ENST00000582950 57 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC020915.5-201ENST00000596836 964 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC139493.1-201ENST00000604368 397 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC005014.3-201ENST00000605985 190 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 AL591167.1-201ENST00000607321 456 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AL359976.1-201ENST00000418655 3528 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 EIF3EP1-201ENST00000433978 1316 ntBASIC7.21□□□□□ -1.26
COL20A1Q9P218 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL20A1Q9P218 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.21□□□□□ -1.26
COL20A1Q9P218 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC027575.3-201ENST00000583058 2747 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 SETP10-201ENST00000424368 814 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC079807.1-201ENST00000429993 481 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 KCTD9P1-201ENST00000430462 1167 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC091965.3-201ENST00000506236 208 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC026688.1-201ENST00000520639 1168 ntBASIC7.2□□□□□ -1.26
COL20A1Q9P218 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL20A1Q9P218 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.2□□□□□ -1.26
COL20A1Q9P218 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms