Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU1-87P-201ENST00000363727 170 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 Y_RNA.263-201ENST00000364659 114 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 GLRX3P2-201ENST00000405027 1038 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 VN1R36P-201ENST00000414936 291 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 NENFP1-201ENST00000419476 466 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC004448.2-201ENST00000422360 586 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 CYCSP46-201ENST00000423569 204 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 OR8F1P-201ENST00000425243 930 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 C1DP1-201ENST00000426049 402 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 TRIM60P18-201ENST00000441518 828 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL359711.1-201ENST00000441999 123 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 RPS27P5-201ENST00000444247 244 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 NIPA2P5-201ENST00000452282 464 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC114755.1-201ENST00000453101 868 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC009022.1-201ENST00000472115 496 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC100843.1-201ENST00000475372 550 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 RN7SL333P-201ENST00000476398 297 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC084024.2-201ENST00000503480 791 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC104090.1-201ENST00000506341 1171 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 IGBP1P5-201ENST00000507524 1000 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC083906.4-201ENST00000514634 987 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 OR5AZ1P-201ENST00000527448 943 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL391840.1-201ENST00000571144 367 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 RN7SL622P-201ENST00000585292 275 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC006238.1-201ENST00000609787 534 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL606760.4-201ENST00000617613 718 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC245033.3-201ENST00000617986 224 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC026336.5-201ENST00000624455 738 ntBASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 AC087501.5-201ENST00000607496 2374 ntBASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
CUEDC1Q9NWM3 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AL022334.1-201ENST00000417397 1726 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TRIM53BP-201ENST00000532912 1720 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RNA5SP301-201ENST00000362537 121 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 Y_RNA.38-201ENST00000362617 102 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 MT-TL1-201ENST00000386347 75 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 SNORA40.2-201ENST00000390847 128 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TPMTP3-201ENST00000411928 735 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 MEAF6P1-201ENST00000416092 327 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC019181.1-201ENST00000417151 310 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RPL22P17-201ENST00000438729 315 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC005840.2-201ENST00000447193 355 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AL591438.2-201ENST00000452635 691 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC092989.1-201ENST00000481235 277 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RPL9P6-201ENST00000492764 598 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms