Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 AC022034.1-201ENST00000512867 2156 ntBASIC6.5□□□□□ -1.37
TM9SF3Q9HD45 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 ZNF658B-201ENST00000602828 3408 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 NCOA4P2-201ENST00000340589 1813 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 RPL5P7-201ENST00000444235 813 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 HMGB1P7-201ENST00000450921 612 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC090589.1-201ENST00000473109 362 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 RPS26P24-201ENST00000497656 331 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC011352.2-201ENST00000514574 1016 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 TRIM51DP-201ENST00000529746 596 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 RN7SL208P-201ENST00000577964 296 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 MIR6811-201ENST00000620409 58 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC009120.7-201ENST00000623452 780 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AP000577.1-201ENST00000624366 878 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 AC022905.1-201ENST00000503430 3048 ntBASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
TM9SF3Q9HD45 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC104966.1-201ENST00000467010 1464 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC012078.1-201ENST00000405035 1646 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 CASC19-246ENST00000641625 1606 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 RPL5P20-201ENST00000403848 896 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 NACAP7-201ENST00000407371 609 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 SNORA77.2-201ENST00000408571 112 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 MTND2P12-201ENST00000417560 1252 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 RPSAP65-201ENST00000429660 595 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AL451063.1-201ENST00000450164 1133 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 RPL5P14-201ENST00000494197 878 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC021733.2-201ENST00000518830 497 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AL162632.2-201ENST00000553933 399 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC106785.4-201ENST00000569492 412 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 GLYATL1P2-202ENST00000588046 902 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC010333.3-201ENST00000615100 402 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC005277.2-201ENST00000617898 390 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 OR1N1-202ENST00000619659 939 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 AC018692.2-201ENST00000624130 348 ntBASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TM9SF3Q9HD45 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms