Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC012175.1-201ENST00000603755 531 ntBASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
UPF2Q9HAU5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
UPF2Q9HAU5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.2
UPF2Q9HAU5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC097634.1-201ENST00000604491 2467 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 KYNUP3-201ENST00000574386 1341 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 RNU11-201ENST00000387069 134 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 RPL18AP14-201ENST00000417685 526 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 GRPEL2P2-201ENST00000421856 670 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC002075.1-201ENST00000457396 676 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC073594.1-201ENST00000462065 364 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 RN7SL352P-201ENST00000466002 277 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC026956.1-201ENST00000558741 396 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 RN7SL426P-201ENST00000579106 295 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC020916.2-201ENST00000591242 360 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AL360012.1-201ENST00000602813 131 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AC114477.1-201ENST00000605097 605 ntBASIC7.58□□□□□ -1.2
UPF2Q9HAU5 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
UPF2Q9HAU5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL451061.1-201ENST00000407887 862 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 YWHAZP5-201ENST00000419975 730 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL589794.1-201ENST00000424971 390 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL354707.3-201ENST00000427308 331 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 VN1R53P-201ENST00000429536 957 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 FECHP1-201ENST00000431896 1214 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL353803.3-201ENST00000444641 335 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 MORF4-201ENST00000447135 971 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL121578.2-201ENST00000448797 447 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC093719.1-201ENST00000480427 441 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC114940.1-201ENST00000512162 1265 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC137549.1-201ENST00000514243 533 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC005519.1-201ENST00000554490 601 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC233699.1-201ENST00000569955 1168 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 SYPL1P2-201ENST00000582878 727 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 DYNLL1P1-201ENST00000595442 269 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC009283.1-201ENST00000615852 645 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 AC005702.3-201ENST00000585345 1447 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 HSPD1P1-201ENST00000503199 1726 ntBASIC7.57□□□□□ -1.2
UPF2Q9HAU5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF2Q9HAU5 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
UPF2Q9HAU5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF2Q9HAU5 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF2Q9HAU5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF2Q9HAU5 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF2Q9HAU5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms