Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC018690.1-201ENST00000608144 626 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 MIR6085-201ENST00000618314 110 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 AC016745.2-201ENST00000608834 3443 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 TCP11X1-202ENST00000622971 1372 ntBASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC28BQ9BUN5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 ADAM24P-201ENST00000398655 2101 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC006600.2-201ENST00000624834 2506 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 MRPS6P2-201ENST00000381143 370 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL079341.1-201ENST00000404701 1207 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 MED28P4-201ENST00000433137 572 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 CBX5P1-201ENST00000468470 561 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 UOX-201ENST00000471089 899 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC090286.3-201ENST00000573133 187 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 SNORD96A-201ENST00000606577 79 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC005858.3-201ENST00000624756 589 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 HDAC1P2-201ENST00000453661 1398 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AL731532.1-201ENST00000623972 4236 ntBASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC28BQ9BUN5 AC109446.4-201ENST00000623235 2755 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 PPIAP24-201ENST00000328558 471 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 SNORD1C-201ENST00000363315 78 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 RN7SKP91-201ENST00000410852 288 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 RPS27AP6-201ENST00000427962 448 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 RN7SL456P-201ENST00000469290 295 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 OR9A1P-202ENST00000484361 945 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC093878.1-201ENST00000515630 432 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC004890.3-201ENST00000605566 1095 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 KDM5DP1-201ENST00000622542 298 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AC069542.2-201ENST00000624816 216 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 OR7E91P-202ENST00000642062 1198 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 AL121839.2-201ENST00000565058 6943 ntBASIC6.12□□□□□ -1.43
CCDC28BQ9BUN5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms