Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL356800.1-201ENST00000553339 735 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC040162.2-201ENST00000573092 157 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AP005431.1-201ENST00000618479 319 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RNF19BPY-201ENST00000458209 1550 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ZNF402P-201ENST00000404435 3100 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RPL5P20-201ENST00000403848 896 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC244452.1-201ENST00000413798 141 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC092593.2-201ENST00000513866 913 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RN7SKP35-201ENST00000517210 151 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC016144.1-201ENST00000548175 1087 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RNA5SP440-201ENST00000612665 119 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 REV3L-214ENST00000619481 969 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TMCC1P1-201ENST00000518897 1980 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RNFT1P3-201ENST00000340898 1052 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 CXCR2P1-202ENST00000443392 1074 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 GAS5-218ENST00000448718 565 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 OR13C1P-201ENST00000457612 963 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC023194.2-201ENST00000465398 406 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 FTX-215ENST00000638681 9771 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC022034.1-201ENST00000512867 2156 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 U3.25-201ENST00000391209 220 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC136624.1-201ENST00000400791 413 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MARK2P12-201ENST00000420129 585 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LSM3P4-201ENST00000502948 309 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL359694.2-201ENST00000567753 1615 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC092821.2-201ENST00000545710 2042 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RPL5P5-201ENST00000392009 893 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL929472.1-201ENST00000417484 429 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RPL12P16-201ENST00000431098 498 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ATP5LP2-201ENST00000440646 311 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 RPL5P9-201ENST00000448118 886 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NXT1P1-201ENST00000458481 316 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC025458.1-201ENST00000506046 166 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 NATP-201ENST00000523491 878 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 CTSLP2-201ENST00000580501 394 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC006924.1-201ENST00000610750 559 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SYNE1Q8NF91 AC073488.2-201ENST00000631903 751 ntBASIC1.95□□□□□ -2.1
SYNE1Q8NF91 LINC02495-203ENST00000636704 242 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms