Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AP000547.3-204ENST00000588548 2523 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL137058.3-201ENST00000624531 3099 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC090643.1-201ENST00000623600 3100 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL117339.4-201ENST00000608335 7063 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 MTCO1P56-201ENST00000401674 224 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL365203.2-201ENST00000423444 196 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RPF2P1-201ENST00000424137 906 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RPL5P6-201ENST00000425640 886 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 MRPS21P3-201ENST00000436696 262 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 EEF1B2P5-201ENST00000444820 548 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 PTMAP1-205ENST00000455552 325 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 CTSLP6-201ENST00000458273 1002 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 TDGF1P6-201ENST00000463873 448 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RPL12P40-201ENST00000467028 488 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RN7SL233P-201ENST00000469988 277 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RN7SL815P-201ENST00000470970 290 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 RPL23AP44-201ENST00000482216 473 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC069528.1-202ENST00000482888 637 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 XKRY-201ENST00000510392 1100 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC233724.10-201ENST00000510454 409 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 OR7E83P-201ENST00000511021 970 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC138866.1-201ENST00000514522 497 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC117383.2-201ENST00000514722 322 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC138938.1-201ENST00000515431 782 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 SCARNA20.1-201ENST00000516009 138 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 OR7E87P-201ENST00000532397 929 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL132640.1-201ENST00000559594 619 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC090888.1-201ENST00000561335 1141 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 BMS1P8-201ENST00000565049 1178 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 MIR5192-201ENST00000579892 92 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 NDUFA3P1-201ENST00000588007 252 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC024589.2-201ENST00000605642 1294 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC103724.4-201ENST00000605981 292 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC023310.4-201ENST00000613130 650 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC135050.6-202ENST00000613584 392 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC015660.5-201ENST00000623238 564 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AC067852.7-201ENST00000623270 535 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 AL049536.1-201ENST00000625043 744 ntBASIC7.42□□□□□ -1.22
PHC3Q8NDX5 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.42□□□□□ -1.22
PHC3Q8NDX5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 AC112243.1-201ENST00000623949 3851 ntBASIC7.41□□□□□ -1.22
PHC3Q8NDX5 KARSP1-201ENST00000451871 1752 ntBASIC7.41□□□□□ -1.22
PHC3Q8NDX5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PHC3Q8NDX5 SNORD113-6-201ENST00000363345 75 ntBASIC7.41□□□□□ -1.22
PHC3Q8NDX5 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms