Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AP001124.1-201ENST00000529628 385 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 MIR378H-201ENST00000579966 83 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 SLC25A36P1-201ENST00000590111 465 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AC010323.2-201ENST00000596405 594 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AC018618.2-201ENST00000604770 446 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 NDUFA8P1-201ENST00000605525 367 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AL021368.3-201ENST00000607119 578 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AC007684.1-201ENST00000609671 477 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AC012488.1-201ENST00000611221 640 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 FAM27E3-202ENST00000614611 340 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 MTND4P16-201ENST00000466108 1367 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 TRIM53BP-201ENST00000532912 1720 ntBASIC8.31□□□□□ -1.08
RNF135Q8IUD6 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF135Q8IUD6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 PSMC1P7-201ENST00000495689 1315 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC087392.3-202ENST00000358446 1754 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC073055.1-201ENST00000456901 1621 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 MIR135B-201ENST00000362189 97 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AL035419.1-201ENST00000397037 564 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC092952.1-201ENST00000397646 1209 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RPL23AP59-201ENST00000399415 461 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RPS26P13-201ENST00000419030 330 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RPS27AP7-201ENST00000422792 455 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RPL23AP76-201ENST00000441860 458 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 USP9YP29-201ENST00000445112 563 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AL157827.1-201ENST00000447622 132 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC109486.1-201ENST00000486833 374 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NPIPP1-203ENST00000547107 1071 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC009779.4-201ENST00000554248 611 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC037479.1-201ENST00000558361 625 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 EIF4A3P1-201ENST00000578499 647 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC090415.1-201ENST00000581877 847 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 OR7E19P-202ENST00000589942 844 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC018714.1-201ENST00000605028 208 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 MIR8075-201ENST00000614354 80 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 pRNA.9-201ENST00000618609 89 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms