Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC009120.3-201ENST00000563335 499 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC007066.2-202ENST00000566531 914 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AL589863.1-201ENST00000595383 631 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC012065.3-201ENST00000602736 439 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 MIR6885-201ENST00000612241 66 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 MIR6503-201ENST00000622884 86 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 TMCC1P1-201ENST00000518897 1980 ntBASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.29□□□□□ -1.4
ZNF549Q6P9A3 AL353763.1-201ENST00000624467 1628 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC023632.6-201ENST00000624338 2177 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 VIM2P-201ENST00000402383 1294 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC097523.2-201ENST00000435551 652 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 WDR82P2-201ENST00000444540 928 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL022237.1-201ENST00000446663 358 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 PPIAP32-201ENST00000449940 472 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL034369.1-201ENST00000453808 477 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 RN7SL221P-201ENST00000466190 281 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC015524.1-201ENST00000491585 472 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC023968.1-201ENST00000560719 475 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 MIR744-201ENST00000578242 98 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC012467.1-201ENST00000607740 256 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL589743.6-201ENST00000611025 117 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL137246.2-201ENST00000613439 662 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC211486.4-201ENST00000621495 113 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC080188.3-201ENST00000624842 748 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC068213.1-201ENST00000625124 226 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 CLUHP10-201ENST00000631979 980 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 SAMMSON-214ENST00000641395 1264 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 AC010401.2-201ENST00000575137 4934 ntBASIC6.28□□□□□ -1.4
ZNF549Q6P9A3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.27□□□□□ -1.4
ZNF549Q6P9A3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
ZNF549Q6P9A3 OR2AH1P-202ENST00000641232 2744 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 AL031123.3-201ENST00000623345 1837 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 SNORD94-201ENST00000386037 137 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 BMP6P1-201ENST00000431230 679 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 OR6R1P-201ENST00000431838 940 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 MTCO3P17-201ENST00000443775 513 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 AC089999.1-201ENST00000460336 374 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 AOX3P-204ENST00000491025 2107 ntBASIC6.27□□□□□ -1.41
ZNF549Q6P9A3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms