Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 Y_RNA.70-201ENST00000362886 110 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 RN7SKP187-201ENST00000365536 330 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 RN7SKP161-201ENST00000411110 305 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ELOCP9-201ENST00000418624 239 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 PTPN2P1-201ENST00000423212 1072 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL049610.1-201ENST00000423374 372 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL365220.1-201ENST00000432923 399 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GTF2IP3-201ENST00000433887 494 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC245452.2-201ENST00000435222 392 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC004865.1-201ENST00000442276 1003 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL358876.1-201ENST00000453364 1075 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL034369.1-201ENST00000453808 477 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC104763.1-201ENST00000475274 360 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC095052.1-201ENST00000509955 863 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 SNX18P25-201ENST00000510539 758 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC022447.1-201ENST00000515358 464 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 MIR3915-201ENST00000578518 97 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GLUD1P2-201ENST00000583339 201 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GLUD1P8-201ENST00000585063 203 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 PRR13P5-201ENST00000596581 442 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC097381.3-201ENST00000608962 462 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL008582.1-201ENST00000609612 442 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC012150.2-201ENST00000621300 544 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 OR5AK4P-201ENST00000635912 903 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC145207.5-201ENST00000582866 2682 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 CR381670.1-201ENST00000624291 1693 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RC3H1Q5TC82 AC036108.4-201ENST00000611654 2516 ntBASIC9.23□□□□□ -0.93
RC3H1Q5TC82 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LRRC2-AS1-201ENST00000599511 2291 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 Y_RNA.61-201ENST00000362835 102 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RN7SKP191-201ENST00000364713 306 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 SNORD116-12-201ENST00000384468 92 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RNU6-83P-201ENST00000384568 112 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL593856.1-201ENST00000419949 805 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 MTCO2P34-201ENST00000421994 607 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 NPM1P24-201ENST00000428039 894 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 ATP5HP2-201ENST00000433885 485 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 FGF7P6-202ENST00000451282 293 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AL157777.1-201ENST00000468100 304 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 UOX-201ENST00000471089 899 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RPS12P31-201ENST00000491419 398 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 MYL12BP2-201ENST00000503948 512 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RN7SKP70-201ENST00000516655 271 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC067904.2-201ENST00000517322 1283 ntBASIC9.22□□□□□ -0.93
RC3H1Q5TC82 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC9.22□□□□□ -0.93
RC3H1Q5TC82 AC116917.1-201ENST00000520558 305 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms