Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AL355974.1-201ENST00000618896 1708 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 MKI67P1-201ENST00000604297 1460 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 RN7SKP28-201ENST00000364770 305 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 SNORD94-201ENST00000386037 137 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 HMGB3P19-201ENST00000403971 560 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 UBE2V1P9-201ENST00000414760 368 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 NPM1P36-201ENST00000415681 835 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AL589794.1-201ENST00000424971 390 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 USP9YP11-201ENST00000427537 717 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC092647.3-201ENST00000443044 633 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 KATNBL1P3-201ENST00000443475 909 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 RN7SL83P-201ENST00000468131 297 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 RN7SL502P-201ENST00000481857 290 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC112184.1-201ENST00000505179 312 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC011352.2-201ENST00000514574 1016 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 RN7SKP196-201ENST00000516267 345 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC007068.2-201ENST00000543168 395 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC124283.4-201ENST00000581815 456 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC005242.1-201ENST00000585658 438 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC036176.3-201ENST00000602456 418 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AP002802.2-201ENST00000605877 235 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC006328.2-201ENST00000623198 397 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC012005.2-201ENST00000624333 397 ntBASIC9.43□□□□□ -0.9
CDCA8Q53HL2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CDCA8Q53HL2 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RNU6-298P-201ENST00000390888 96 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 FDPSP5-201ENST00000399474 1057 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RN7SKP205-201ENST00000410999 307 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RMRPP5-201ENST00000411156 267 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RPL23AP18-201ENST00000416139 468 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AC006509.1-201ENST00000420788 634 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 SOCS5P1-201ENST00000440415 949 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 UBQLN1P1-207ENST00000441056 1169 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AL445991.1-201ENST00000450381 475 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC9.42□□□□□ -0.9
CDCA8Q53HL2 AL390728.3-201ENST00000452704 270 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RN7SL70P-201ENST00000478322 302 ntBASIC9.42□□□□□ -0.9
CDCA8Q53HL2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms