Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 VN1R20P-201ENST00000425215 966 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 POU5F1P5-201ENST00000445059 658 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AL022319.1-201ENST00000458183 1167 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AC098818.1-201ENST00000478593 252 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AL137246.2-201ENST00000613439 662 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 AC018717.1-201ENST00000457712 1505 ntBASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN20Q4JDL3 OR52B5P-204ENST00000641744 3467 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 SNORA70H-201ENST00000383910 135 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 SNORA70J-201ENST00000384182 135 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 RPSAP32-201ENST00000432681 526 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC073594.1-201ENST00000462065 364 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 SNX18P24-201ENST00000505249 671 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 ZNF519P4-201ENST00000514008 125 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC092865.1-201ENST00000544395 1023 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC090115.2-201ENST00000548060 883 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 RPSAP75-201ENST00000605848 301 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 uc_338.29-201ENST00000615099 168 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC003992.1-201ENST00000635364 557 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AKAP17BP-201ENST00000431706 2719 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC063923.1-201ENST00000478982 1619 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 AC092724.1-201ENST00000624623 3397 ntBASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN20Q4JDL3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 SHQ1P1-201ENST00000437111 1544 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AC010086.1-201ENST00000437359 1052 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 PPIAP10-201ENST00000438675 458 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 GAPDHP23-201ENST00000444823 993 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 RN7SL568P-201ENST00000493069 298 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 NATP-201ENST00000523491 878 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AC036111.2-201ENST00000533247 901 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 AC011500.1-201ENST00000601963 469 ntBASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN20Q4JDL3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms