Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 DSTNP5-201ENST00000427921 523 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 MGAT2P1-201ENST00000449718 797 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 RPS7P10-201ENST00000464254 603 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 MARK2P8-201ENST00000476069 952 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 RPS14P8-201ENST00000478778 369 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 TPT1P8-201ENST00000510120 555 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 BMS1P7-201ENST00000602440 1052 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AL355816.2-201ENST00000610049 647 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 GAPDHP41-201ENST00000613707 975 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC009269.6-201ENST00000621778 588 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 DDX43P1-201ENST00000510713 1763 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 RN7SKP62-201ENST00000384539 329 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC006511.2-201ENST00000388966 660 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 UBTFL2-201ENST00000411859 1191 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 BMP6P1-201ENST00000431230 679 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC128677.1-201ENST00000436016 442 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC011742.2-201ENST00000443818 352 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AL034399.1-201ENST00000451535 380 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 NPM1P29-201ENST00000483112 803 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 RN7SL37P-201ENST00000490461 307 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC105420.1-201ENST00000504389 582 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC010442.1-201ENST00000515583 816 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 MRPS21P9-201ENST00000571150 257 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 MIR4732-201ENST00000581873 76 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AL137246.2-201ENST00000613439 662 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 CASC19-261ENST00000641853 1638 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 AC122713.2-201ENST00000624942 3335 ntBASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC144BQ3MJ40 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
CCDC144BQ3MJ40 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms