Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 RNU6-481P-201ENST00000384194 107 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 Y_RNA.559-201ENST00000384686 107 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 TEX41-202ENST00000414256 604 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX4Q06945 ELOCP17-201ENST00000414751 326 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX4Q06945 MTND4P20-201ENST00000424125 869 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX4Q06945 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX4Q06945 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX4Q06945 MTATP6P13-201ENST00000438531 667 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 VN1R32P-201ENST00000452234 905 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 RN7SL868P-201ENST00000485915 303 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 FABP5P6-201ENST00000510588 409 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 AC119751.1-201ENST00000513357 765 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX4Q06945 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 BUD31P1-201ENST00000521828 359 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX4Q06945 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 NOP56P3-201ENST00000549457 385 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.63□□□□□ -1.19
SOX4Q06945 SETP1-201ENST00000556014 845 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.63□□□□□ -1.19
SOX4Q06945 AC009955.2-201ENST00000597288 542 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC068802.1-201ENST00000603420 732 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC079880.2-201ENST00000603790 1213 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 DPRXP5-201ENST00000604662 539 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 AL158062.1-201ENST00000619632 745 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX4Q06945 MIR665-201ENST00000635949 72 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 HSPD1P1-201ENST00000503199 1726 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SOX4Q06945 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.63□□□□□ -1.19
SOX4Q06945 KARSP2-201ENST00000415696 1639 ntBASIC7.63□□□□□ -1.19
SOX4Q06945 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SOX4Q06945 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 AC023818.2-201ENST00000623817 2304 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AP002800.1-201ENST00000624982 2225 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL603865.2-201ENST00000401679 213 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 HSPD1P16-201ENST00000402302 394 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL021407.1-201ENST00000404531 386 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 RPL18AP14-201ENST00000417685 526 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC114755.4-201ENST00000439114 443 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL845321.1-201ENST00000444603 348 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL589880.1-201ENST00000448271 287 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 OR52Y1P-201ENST00000452418 828 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC063955.1-201ENST00000462872 685 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 NDUFA5P5-201ENST00000468361 342 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 RN7SL655P-201ENST00000486087 298 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SOX4Q06945 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 DCAF13P2-201ENST00000514188 555 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 AP002004.1-206ENST00000532441 876 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC016144.1-201ENST00000548175 1087 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SOX4Q06945 AGGF1P4-201ENST00000568249 801 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 AL121834.1-201ENST00000572284 509 ntBASIC7.62□□□□□ -1.19
SOX4Q06945 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.62□□□□□ -1.19
SOX4Q06945 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms