Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNA5SP122-201ENST00000384457 108 ntBASIC5.21□□□□□ -1.58
LMO4P61968 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.21□□□□□ -1.58
LMO4P61968 SEC63P1-201ENST00000425785 1258 ntBASIC5.21□□□□□ -1.58
LMO4P61968 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AC023141.3-201ENST00000436698 278 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 MGAT2P1-201ENST00000449718 797 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC023194.2-201ENST00000465398 406 ntBASIC5.21□□□□□ -1.58
LMO4P61968 MTCO3P42-201ENST00000509488 518 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 MTCO3P39-201ENST00000514812 518 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.21□□□□□ -1.58
LMO4P61968 IGKV2-4-201ENST00000523070 340 ntBASIC5.21□□□□□ -1.58
LMO4P61968 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 TRIM77BP-201ENST00000524985 1119 ntBASIC5.21□□□□□ -1.58
LMO4P61968 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 NANOGNBP2-201ENST00000544753 553 ntBASIC5.21□□□□□ -1.58
LMO4P61968 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AC079905.1-201ENST00000549280 475 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 TMF1P1-201ENST00000576058 373 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.21□□□□□ -1.58
LMO4P61968 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 AC067773.1-201ENST00000603284 1094 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC097467.4-201ENST00000605504 141 ntBASIC5.21□□□□□ -1.58
LMO4P61968 AC092953.2-201ENST00000608000 699 ntBASIC5.21□□□□□ -1.58
LMO4P61968 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 AC024884.1-201ENST00000620583 399 ntBASIC5.21□□□□□ -1.58
LMO4P61968 MIR7159-201ENST00000620587 66 ntBASIC5.21□□□□□ -1.58
LMO4P61968 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 CUBNP3-201ENST00000457461 1784 ntBASIC5.21□□□□□ -1.58
LMO4P61968 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
LMO4P61968 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.21□□□□□ -1.58
LMO4P61968 CTAGE11P-201ENST00000451540 2353 ntBASIC5.21□□□□□ -1.58
LMO4P61968 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
LMO4P61968 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMO4P61968 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.21□□□□□ -1.58
LMO4P61968 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.21□□□□□ -1.58
LMO4P61968 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LMO4P61968 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 RN7SKP269-201ENST00000365545 319 ntBASIC5.2□□□□□ -1.58
LMO4P61968 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 MIR130B-202ENST00000385018 82 ntBASIC5.2□□□□□ -1.58
LMO4P61968 MIR640-201ENST00000385086 96 ntBASIC5.2□□□□□ -1.58
LMO4P61968 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 U3.43-201ENST00000410734 213 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AC130360.1-201ENST00000425489 1117 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 AL359839.1-201ENST00000451975 1160 ntBASIC5.2□□□□□ -1.58
LMO4P61968 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.2□□□□□ -1.58
LMO4P61968 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 NPM1P27-201ENST00000502784 830 ntBASIC5.2□□□□□ -1.58
LMO4P61968 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.2□□□□□ -1.58
LMO4P61968 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.2□□□□□ -1.58
LMO4P61968 UGT2A3P7-201ENST00000510485 734 ntBASIC5.2□□□□□ -1.58
LMO4P61968 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.2□□□□□ -1.58
LMO4P61968 AC022616.2-201ENST00000523185 300 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AC130365.2-201ENST00000525882 1201 ntBASIC5.2□□□□□ -1.58
LMO4P61968 AP001858.2-201ENST00000536213 601 ntBASIC5.2□□□□□ -1.58
LMO4P61968 TRAV11-201ENST00000539512 339 ntBASIC5.2□□□□□ -1.58
LMO4P61968 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMO4P61968 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.2□□□□□ -1.58
LMO4P61968 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms