Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.23□□□□□ -1.57
SPCS3P61009 PUDPP2-201ENST00000431423 643 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 RPL14P5-201ENST00000436474 730 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC027124.1-201ENST00000440852 466 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC009237.1-201ENST00000442127 744 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 GAPDHP20-201ENST00000444107 1007 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC091544.1-201ENST00000484702 348 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.23□□□□□ -1.57
SPCS3P61009 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC068993.1-201ENST00000546724 589 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 WDR45BP1-201ENST00000583470 1029 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 MRPL57P3-201ENST00000619218 176 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 MRPL57P1-201ENST00000621486 265 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC006328.2-201ENST00000623198 397 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 AC012005.2-201ENST00000624333 397 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 AC003985.2-201ENST00000562268 1669 ntBASIC5.23□□□□□ -1.57
SPCS3P61009 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPCS3P61009 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SPCS3P61009 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
SPCS3P61009 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.23□□□□□ -1.57
SPCS3P61009 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.23□□□□□ -1.57
SPCS3P61009 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 SOCS5P3-201ENST00000425115 1576 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.22□□□□□ -1.57
SPCS3P61009 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 TRIM53CP-201ENST00000531490 1354 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 MIR99A-201ENST00000384906 81 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 LDHAP5-201ENST00000394996 622 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 ADAM24P-201ENST00000398655 2101 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SPCS3P61009 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 HMGN2P27-201ENST00000427352 270 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.22□□□□□ -1.57
SPCS3P61009 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
SPCS3P61009 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 AP005902.2-201ENST00000518393 307 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 AC090286.3-201ENST00000573133 187 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 MIR378C-201ENST00000578683 81 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.22□□□□□ -1.57
SPCS3P61009 EXOSC3P2-201ENST00000594464 497 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 AC000095.2-202ENST00000637415 154 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SPCS3P61009 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SPCS3P61009 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.22□□□□□ -1.57
SPCS3P61009 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 AL121768.1-201ENST00000613917 2544 ntBASIC5.22□□□□□ -1.57
SPCS3P61009 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms