Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC087893.2-201ENST00000623272 255 ntBASIC7.6□□□□□ -1.19
LIG3P49916 AC129908.1-201ENST00000624553 648 ntBASIC7.6□□□□□ -1.19
LIG3P49916 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG3P49916 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 AP003175.1-201ENST00000641383 6658 ntBASIC7.6□□□□□ -1.19
LIG3P49916 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG3P49916 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.6□□□□□ -1.19
LIG3P49916 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
LIG3P49916 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG3P49916 HSPA8P11-201ENST00000508840 1898 ntBASIC7.6□□□□□ -1.19
LIG3P49916 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG3P49916 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AC015871.3-201ENST00000618835 2261 ntBASIC7.59□□□□□ -1.19
LIG3P49916 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 U6.112-201ENST00000384129 70 ntBASIC7.59□□□□□ -1.19
LIG3P49916 Y_RNA.578-201ENST00000390903 88 ntBASIC7.59□□□□□ -1.19
LIG3P49916 LARP1P1-201ENST00000407692 292 ntBASIC7.59□□□□□ -1.19
LIG3P49916 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 SNX18P3-201ENST00000424993 835 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 MTCO3P30-201ENST00000426425 670 ntBASIC7.59□□□□□ -1.19
LIG3P49916 MUPP-201ENST00000438111 566 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 CYCSP42-201ENST00000450823 238 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AGKP1-201ENST00000455254 1263 ntBASIC7.59□□□□□ -1.19
LIG3P49916 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AC005410.1-202ENST00000460347 485 ntBASIC7.59□□□□□ -1.19
LIG3P49916 RN7SL834P-201ENST00000461450 286 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC104849.1-201ENST00000462623 405 ntBASIC7.59□□□□□ -1.19
LIG3P49916 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.59□□□□□ -1.19
LIG3P49916 RN7SL233P-201ENST00000469988 277 ntBASIC7.59□□□□□ -1.19
LIG3P49916 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 RPS27AP16-201ENST00000492222 470 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 MTND2P26-201ENST00000528255 1029 ntBASIC7.59□□□□□ -1.19
LIG3P49916 OR8I1P-201ENST00000529291 931 ntBASIC7.59□□□□□ -1.19
LIG3P49916 OR7E96P-201ENST00000530816 976 ntBASIC7.59□□□□□ -1.19
LIG3P49916 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG3P49916 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.59□□□□□ -1.19
LIG3P49916 FCGR1CP-201ENST00000579737 1127 ntBASIC7.59□□□□□ -1.19
LIG3P49916 MIR4437-201ENST00000581331 60 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC069366.1-201ENST00000583159 838 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 AL392048.1-201ENST00000613946 534 ntBASIC7.59□□□□□ -1.19
LIG3P49916 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AC010975.3-201ENST00000618727 978 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AL603755.1-201ENST00000619504 163 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AL121895.2-201ENST00000619558 447 ntBASIC7.59□□□□□ -1.19
LIG3P49916 PART1_3.1-201ENST00000619680 131 ntBASIC7.59□□□□□ -1.19
LIG3P49916 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 CASC19-222ENST00000641321 1173 ntBASIC7.59□□□□□ -1.19
LIG3P49916 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG3P49916 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG3P49916 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG3P49916 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.59□□□□□ -1.2
LIG3P49916 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.59□□□□□ -1.2
LIG3P49916 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
LIG3P49916 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
LIG3P49916 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
LIG3P49916 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LIG3P49916 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
LIG3P49916 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LIG3P49916 PSMC1P7-201ENST00000495689 1315 ntBASIC7.58□□□□□ -1.2
LIG3P49916 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms