Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC061999.1-201ENST00000624454 177 ntBASIC5.64□□□□□ -1.51
SRP9P49458 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 AC022613.3-201ENST00000560740 1346 ntBASIC5.64□□□□□ -1.51
SRP9P49458 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SRP9P49458 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 AC074141.1-201ENST00000588129 2995 ntBASIC5.63□□□□□ -1.51
SRP9P49458 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 SNORD94-201ENST00000386037 137 ntBASIC5.63□□□□□ -1.51
SRP9P49458 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 AC117434.1-201ENST00000419971 836 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AC006509.1-201ENST00000420788 634 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 AC083855.1-201ENST00000440041 258 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 HMGN1P32-201ENST00000441744 256 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 AC009963.4-201ENST00000448535 339 ntBASIC5.63□□□□□ -1.51
SRP9P49458 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 RPS3AP49-201ENST00000472161 790 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AP003385.3-201ENST00000472498 287 ntBASIC5.63□□□□□ -1.51
SRP9P49458 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 AC012123.2-201ENST00000485809 248 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.63□□□□□ -1.51
SRP9P49458 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.63□□□□□ -1.51
SRP9P49458 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.63□□□□□ -1.51
SRP9P49458 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.63□□□□□ -1.51
SRP9P49458 MIR5010-201ENST00000582846 120 ntBASIC5.63□□□□□ -1.51
SRP9P49458 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.63□□□□□ -1.51
SRP9P49458 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.63□□□□□ -1.51
SRP9P49458 AC024255.1-201ENST00000614376 102 ntBASIC5.63□□□□□ -1.51
SRP9P49458 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.63□□□□□ -1.51
SRP9P49458 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.63□□□□□ -1.51
SRP9P49458 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SRP9P49458 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.63□□□□□ -1.51
SRP9P49458 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SRP9P49458 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.62□□□□□ -1.51
SRP9P49458 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SRP9P49458 RNA5SP140-201ENST00000364524 92 ntBASIC5.62□□□□□ -1.51
SRP9P49458 SNORA7A-201ENST00000384765 139 ntBASIC5.62□□□□□ -1.51
SRP9P49458 MIR551B-201ENST00000384984 96 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 AL359092.1-201ENST00000417156 265 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.62□□□□□ -1.51
SRP9P49458 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 AC093815.1-201ENST00000508637 280 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.62□□□□□ -1.51
SRP9P49458 AC005519.1-201ENST00000554490 601 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 RN7SL208P-201ENST00000577964 296 ntBASIC5.62□□□□□ -1.51
SRP9P49458 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 AL356986.1-201ENST00000604085 341 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AL136097.3-201ENST00000611097 505 ntBASIC5.62□□□□□ -1.51
SRP9P49458 MIR6849-201ENST00000618543 69 ntBASIC5.62□□□□□ -1.51
SRP9P49458 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.62□□□□□ -1.51
SRP9P49458 RAB28P4-201ENST00000622233 665 ntBASIC5.62□□□□□ -1.51
SRP9P49458 MIR6503-201ENST00000622884 86 ntBASIC5.62□□□□□ -1.51
SRP9P49458 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms