Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CX3CR1P49238 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 SNORD35A-201ENST00000363389 86 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 RNU1-84P-201ENST00000365447 164 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CR1P49238 RN7SKP221-201ENST00000410420 301 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC006509.1-201ENST00000420788 634 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AL139184.1-202ENST00000422303 222 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 MED28P4-201ENST00000433137 572 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 COL11A2P1-205ENST00000441798 676 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AC103563.5-201ENST00000455643 364 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CR1P49238 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
CX3CR1P49238 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CR1P49238 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 IGKV2-19-201ENST00000518132 283 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 RPL3P13-201ENST00000550415 216 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 HNRNPCP1-201ENST00000556181 766 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AC023968.1-201ENST00000560719 475 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AC007494.1-201ENST00000562293 760 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC133552.4-201ENST00000576103 676 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 AL139041.1-201ENST00000605480 610 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 MIR6849-201ENST00000618543 69 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 AP001153.1-201ENST00000641024 338 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 SHQ1P1-201ENST00000437111 1544 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 MAPK10-287ENST00000641217 3037 ntBASIC5.56□□□□□ -1.52
CX3CR1P49238 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CX3CR1P49238 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CX3CR1P49238 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CX3CR1P49238 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.56□□□□□ -1.52
CX3CR1P49238 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 OR4G1P-202ENST00000641173 1788 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CX3CR1P49238 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 ZNF37CP-201ENST00000406795 241 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC021876.1-201ENST00000425959 359 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC083862.1-201ENST00000427378 1242 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AL022237.1-201ENST00000446663 358 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AL451063.1-201ENST00000450164 1133 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 NPM1P9-201ENST00000453156 844 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 VPS25P1-201ENST00000455691 508 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CR1P49238 RNA5SP400-201ENST00000517155 111 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.55□□□□□ -1.52
CX3CR1P49238 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 OR4H6P-201ENST00000563771 921 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AC007204.1-201ENST00000621794 555 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC022726.2-201ENST00000634673 547 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AC135068.11-201ENST00000636378 921 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AL353743.3-201ENST00000442109 1468 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms