Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.4□□□□□ -1.54
CDX1P47902 AC007537.1-201ENST00000539347 327 ntBASIC5.4□□□□□ -1.54
CDX1P47902 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.4□□□□□ -1.54
CDX1P47902 AC068408.1-201ENST00000577406 1144 ntBASIC5.4□□□□□ -1.54
CDX1P47902 MIR378C-201ENST00000578683 81 ntBASIC5.4□□□□□ -1.54
CDX1P47902 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.4□□□□□ -1.54
CDX1P47902 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.4□□□□□ -1.54
CDX1P47902 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.4□□□□□ -1.54
CDX1P47902 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.4□□□□□ -1.54
CDX1P47902 MRPL57P3-201ENST00000619218 176 ntBASIC5.4□□□□□ -1.54
CDX1P47902 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 AP005212.3-201ENST00000619964 528 ntBASIC5.4□□□□□ -1.54
CDX1P47902 AC106782.7-201ENST00000624024 418 ntBASIC5.4□□□□□ -1.54
CDX1P47902 AC133555.5-201ENST00000624430 418 ntBASIC5.4□□□□□ -1.54
CDX1P47902 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.4□□□□□ -1.54
CDX1P47902 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.4□□□□□ -1.55
CDX1P47902 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.4□□□□□ -1.55
CDX1P47902 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.4□□□□□ -1.55
CDX1P47902 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 TRIM53CP-201ENST00000531490 1354 ntBASIC5.4□□□□□ -1.55
CDX1P47902 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CDX1P47902 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDX1P47902 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 CASC19-238ENST00000641523 1558 ntBASIC5.39□□□□□ -1.55
CDX1P47902 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 AL607077.1-201ENST00000401718 499 ntBASIC5.39□□□□□ -1.55
CDX1P47902 MTND3P20-201ENST00000407663 186 ntBASIC5.39□□□□□ -1.55
CDX1P47902 RN7SKP91-201ENST00000410852 288 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.39□□□□□ -1.55
CDX1P47902 HMGN1P6-201ENST00000438508 291 ntBASIC5.39□□□□□ -1.55
CDX1P47902 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 AL355355.1-201ENST00000442900 793 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.39□□□□□ -1.55
CDX1P47902 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.39□□□□□ -1.55
CDX1P47902 GOT2P2-201ENST00000450663 1251 ntBASIC5.39□□□□□ -1.55
CDX1P47902 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 AP000805.1-201ENST00000471604 784 ntBASIC5.39□□□□□ -1.55
CDX1P47902 PPP1R2P6-201ENST00000478565 588 ntBASIC5.39□□□□□ -1.55
CDX1P47902 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 AC026782.2-201ENST00000510845 636 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AC113191.1-201ENST00000517759 403 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 AC131935.1-201ENST00000524621 333 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AP002004.1-206ENST00000532441 876 ntBASIC5.39□□□□□ -1.55
CDX1P47902 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.39□□□□□ -1.55
CDX1P47902 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 AC092375.1-201ENST00000550410 637 ntBASIC5.39□□□□□ -1.55
CDX1P47902 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 SNORA70D-201ENST00000578836 135 ntBASIC5.39□□□□□ -1.55
CDX1P47902 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.39□□□□□ -1.55
CDX1P47902 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDX1P47902 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 AC112255.1-201ENST00000624070 2493 ntBASIC5.39□□□□□ -1.55
CDX1P47902 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.39□□□□□ -1.55
CDX1P47902 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDX1P47902 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CDX1P47902 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDX1P47902 AL121949.2-201ENST00000403446 1548 ntBASIC5.38□□□□□ -1.55
CDX1P47902 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.38□□□□□ -1.55
CDX1P47902 MTCO1P28-201ENST00000574177 1528 ntBASIC5.38□□□□□ -1.55
CDX1P47902 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CDX1P47902 DNM1P47-203ENST00000571780 12667 ntBASIC5.38□□□□□ -1.55
CDX1P47902 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDX1P47902 ATP5BP1-201ENST00000411980 1574 ntBASIC5.38□□□□□ -1.55
CDX1P47902 AC009120.2-204ENST00000621548 2032 ntBASIC5.38□□□□□ -1.55
CDX1P47902 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.38□□□□□ -1.55
CDX1P47902 AP005139.1-201ENST00000580702 1647 ntBASIC5.38□□□□□ -1.55
CDX1P47902 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms