Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AP000866.6-201ENST00000638898 3579 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC073342.2-201ENST00000595842 1800 ntBASIC7.15□□□□□ -1.26
CIITAP33076 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 GUCY1B2-204ENST00000531898 1979 ntBASIC7.15□□□□□ -1.26
CIITAP33076 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.15□□□□□ -1.26
CIITAP33076 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CIITAP33076 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CIITAP33076 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 RBBP4P5-201ENST00000398583 1266 ntBASIC7.15□□□□□ -1.26
CIITAP33076 RN7SKP121-201ENST00000410842 305 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 RPL36P18-201ENST00000419316 318 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 AL354893.1-201ENST00000433735 348 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AL451136.1-201ENST00000435399 325 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.15□□□□□ -1.26
CIITAP33076 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CIITAP33076 AL590004.3-202ENST00000445883 451 ntBASIC7.15□□□□□ -1.26
CIITAP33076 EEF1B2P3-201ENST00000447718 678 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC068491.1-201ENST00000449539 1241 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AL133351.3-201ENST00000454998 193 ntBASIC7.15□□□□□ -1.26
CIITAP33076 RN7SL741P-201ENST00000482473 289 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 AC113367.2-201ENST00000505749 160 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC095052.1-201ENST00000509955 863 ntBASIC7.15□□□□□ -1.26
CIITAP33076 SNX18P25-201ENST00000510539 758 ntBASIC7.15□□□□□ -1.26
CIITAP33076 HMGN1P17-201ENST00000513734 295 ntBASIC7.15□□□□□ -1.26
CIITAP33076 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.15□□□□□ -1.26
CIITAP33076 RNA5SP473-201ENST00000516402 125 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.15□□□□□ -1.26
CIITAP33076 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 AC004232.2-201ENST00000574245 821 ntBASIC7.15□□□□□ -1.26
CIITAP33076 MIR3908-201ENST00000579798 126 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.15□□□□□ -1.26
CIITAP33076 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 AL080312.2-201ENST00000613001 630 ntBASIC7.15□□□□□ -1.26
CIITAP33076 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.15□□□□□ -1.26
CIITAP33076 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.15□□□□□ -1.26
CIITAP33076 MIR6806-201ENST00000622141 64 ntBASIC7.15□□□□□ -1.26
CIITAP33076 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CIITAP33076 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
CIITAP33076 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
CIITAP33076 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.15□□□□□ -1.27
CIITAP33076 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CIITAP33076 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.15□□□□□ -1.27
CIITAP33076 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CIITAP33076 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CIITAP33076 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CIITAP33076 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CIITAP33076 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CIITAP33076 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CIITAP33076 RNA5SP478-201ENST00000364657 115 ntBASIC7.14□□□□□ -1.27
CIITAP33076 MIR1275-201ENST00000408770 80 ntBASIC7.14□□□□□ -1.27
CIITAP33076 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 AC010086.1-201ENST00000437359 1052 ntBASIC7.14□□□□□ -1.27
CIITAP33076 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.14□□□□□ -1.27
CIITAP33076 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.14□□□□□ -1.27
CIITAP33076 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 IGHV1-14-201ENST00000523391 241 ntBASIC7.14□□□□□ -1.27
CIITAP33076 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 AL391261.1-201ENST00000555712 1479 ntBASIC7.14□□□□□ -1.27
CIITAP33076 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.14□□□□□ -1.27
CIITAP33076 RPSAP75-201ENST00000605848 301 ntBASIC7.14□□□□□ -1.27
CIITAP33076 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 PCA3_2.1-201ENST00000612507 409 ntBASIC7.14□□□□□ -1.27
CIITAP33076 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 TCL6_3.1-201ENST00000619064 137 ntBASIC7.14□□□□□ -1.27
CIITAP33076 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.14□□□□□ -1.27
CIITAP33076 CASC19-274ENST00000642018 970 ntBASIC7.14□□□□□ -1.27
CIITAP33076 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms