Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 RNU5F-7P-201ENST00000363696 115 ntBASIC8.18□□□□□ -1.1
VARSP26640 RNU6-660P-201ENST00000364566 109 ntBASIC8.18□□□□□ -1.1
VARSP26640 MIR146B-201ENST00000365699 73 ntBASIC8.18□□□□□ -1.1
VARSP26640 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 Y_RNA.573-201ENST00000384763 105 ntBASIC8.18□□□□□ -1.1
VARSP26640 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 RNGTTP1-201ENST00000420965 728 ntBASIC8.18□□□□□ -1.1
VARSP26640 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 AL512286.1-201ENST00000439244 400 ntBASIC8.18□□□□□ -1.1
VARSP26640 RAB28P3-201ENST00000448325 597 ntBASIC8.18□□□□□ -1.1
VARSP26640 AL365436.1-201ENST00000452587 495 ntBASIC8.18□□□□□ -1.1
VARSP26640 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 FTH1P4-201ENST00000480365 553 ntBASIC8.18□□□□□ -1.1
VARSP26640 AC104164.4-201ENST00000483456 493 ntBASIC8.18□□□□□ -1.1
VARSP26640 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 AC114967.1-201ENST00000504890 259 ntBASIC8.18□□□□□ -1.1
VARSP26640 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 STMN2-203ENST00000518491 585 ntTSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 IGLVI-68-201ENST00000519525 345 ntBASIC8.18□□□□□ -1.1
VARSP26640 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.18□□□□□ -1.1
VARSP26640 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 ULK4P2-202ENST00000564187 492 ntBASIC8.18□□□□□ -1.1
VARSP26640 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC8.18□□□□□ -1.1
VARSP26640 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC8.18□□□□□ -1.1
VARSP26640 MIR5008-201ENST00000584300 94 ntBASIC8.18□□□□□ -1.1
VARSP26640 RPL10P15-201ENST00000585756 315 ntBASIC8.18□□□□□ -1.1
VARSP26640 SNRPCP20-201ENST00000588011 210 ntBASIC8.18□□□□□ -1.1
VARSP26640 AC026150.3-201ENST00000602595 499 ntBASIC8.18□□□□□ -1.1
VARSP26640 AL009028.1-201ENST00000604895 802 ntBASIC8.18□□□□□ -1.1
VARSP26640 AC023983.2-201ENST00000608010 562 ntBASIC8.18□□□□□ -1.1
VARSP26640 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 AC027139.2-201ENST00000615639 448 ntBASIC8.18□□□□□ -1.1
VARSP26640 AL445264.1-201ENST00000621719 171 ntBASIC8.18□□□□□ -1.1
VARSP26640 AL157359.3-201ENST00000623771 217 ntBASIC8.18□□□□□ -1.1
VARSP26640 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 OR7A2P-202ENST00000641312 1219 ntBASIC8.18□□□□□ -1.1
VARSP26640 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 XRCC6P3-201ENST00000422187 1621 ntBASIC8.18□□□□□ -1.1
VARSP26640 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 MIR425-201ENST00000362162 87 ntBASIC8.17□□□□□ -1.1
VARSP26640 RNA5SP145-201ENST00000363124 125 ntBASIC8.17□□□□□ -1.1
VARSP26640 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.17□□□□□ -1.1
VARSP26640 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 AC006457.1-201ENST00000420733 392 ntBASIC8.17□□□□□ -1.1
VARSP26640 RPE-205ENST00000429907 925 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 PMCHL2-203ENST00000457791 237 ntBASIC8.17□□□□□ -1.1
VARSP26640 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 RN7SL598P-201ENST00000494391 294 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 899.1 ms