Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL162632.2-201ENST00000553933 399 ntBASIC6.96□□□□□ -1.3
BDNFP23560 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.96□□□□□ -1.3
BDNFP23560 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 MTND2P13-201ENST00000577438 1039 ntBASIC6.96□□□□□ -1.3
BDNFP23560 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 AC063977.7-201ENST00000594454 337 ntBASIC6.96□□□□□ -1.3
BDNFP23560 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 AL356986.1-201ENST00000604085 341 ntBASIC6.96□□□□□ -1.3
BDNFP23560 AL589743.6-201ENST00000611025 117 ntBASIC6.96□□□□□ -1.3
BDNFP23560 U1.41-201ENST00000617626 165 ntBASIC6.96□□□□□ -1.3
BDNFP23560 AL590410.1-201ENST00000617925 333 ntBASIC6.96□□□□□ -1.3
BDNFP23560 SNX18P10-201ENST00000625014 519 ntBASIC6.96□□□□□ -1.3
BDNFP23560 OR8A1-204ENST00000642111 1145 ntBASIC6.96□□□□□ -1.3
BDNFP23560 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
BDNFP23560 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 AC007485.2-201ENST00000623493 1667 ntBASIC6.96□□□□□ -1.3
BDNFP23560 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
BDNFP23560 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
BDNFP23560 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
BDNFP23560 LPAL2-203ENST00000454031 2498 ntBASIC6.95□□□□□ -1.3
BDNFP23560 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
BDNFP23560 AC005702.3-201ENST00000585345 1447 ntBASIC6.95□□□□□ -1.3
BDNFP23560 CLCA3P-203ENST00000490028 2781 ntBASIC6.95□□□□□ -1.3
BDNFP23560 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 RN7SKP250-201ENST00000363924 321 ntBASIC6.95□□□□□ -1.3
BDNFP23560 RNU1-84P-201ENST00000365447 164 ntBASIC6.95□□□□□ -1.3
BDNFP23560 AC096537.2-201ENST00000413707 714 ntBASIC6.95□□□□□ -1.3
BDNFP23560 AL359092.1-201ENST00000417156 265 ntBASIC6.95□□□□□ -1.3
BDNFP23560 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 HMGB3P10-201ENST00000434734 572 ntBASIC6.95□□□□□ -1.3
BDNFP23560 CLNS1AP1-201ENST00000435954 682 ntBASIC6.95□□□□□ -1.3
BDNFP23560 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 OR11I1P-201ENST00000486033 954 ntBASIC6.95□□□□□ -1.3
BDNFP23560 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 RPL5P14-201ENST00000494197 878 ntBASIC6.95□□□□□ -1.3
BDNFP23560 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 RNU6-319P-201ENST00000516025 108 ntBASIC6.95□□□□□ -1.3
BDNFP23560 SCARNA5-201ENST00000516201 276 ntBASIC6.95□□□□□ -1.3
BDNFP23560 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.95□□□□□ -1.3
BDNFP23560 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 SYPL1P2-201ENST00000582878 727 ntBASIC6.95□□□□□ -1.3
BDNFP23560 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.95□□□□□ -1.3
BDNFP23560 AC011891.2-201ENST00000604949 397 ntBASIC6.95□□□□□ -1.3
BDNFP23560 AC009779.8-202ENST00000607990 932 ntBASIC6.95□□□□□ -1.3
BDNFP23560 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.95□□□□□ -1.3
BDNFP23560 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
BDNFP23560 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 MTCO1P15-201ENST00000529569 1526 ntBASIC6.95□□□□□ -1.3
BDNFP23560 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.95□□□□□ -1.3
BDNFP23560 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.95□□□□□ -1.3
BDNFP23560 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
BDNFP23560 AC092725.2-201ENST00000567658 1389 ntBASIC6.95□□□□□ -1.3
BDNFP23560 OR10AB1P-202ENST00000641219 1686 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
BDNFP23560 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 AL139384.2-201ENST00000613809 3590 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AC005618.1-201ENST00000606901 3148 ntBASIC6.94□□□□□ -1.3
BDNFP23560 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 MIR365B-201ENST00000362317 111 ntBASIC6.94□□□□□ -1.3
BDNFP23560 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.94□□□□□ -1.3
BDNFP23560 GAPDHP15-201ENST00000398586 975 ntBASIC6.94□□□□□ -1.3
BDNFP23560 RPL5P20-201ENST00000403848 896 ntBASIC6.94□□□□□ -1.3
BDNFP23560 THEM7P-201ENST00000419556 672 ntBASIC6.94□□□□□ -1.3
BDNFP23560 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms