Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PDGFRAP16234 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFRAP16234 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFRAP16234 AC130360.2-201ENST00000533477 1556 ntBASIC6.69□□□□□ -1.34
PDGFRAP16234 AL132656.3-201ENST00000606384 1595 ntBASIC6.69□□□□□ -1.34
PDGFRAP16234 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFRAP16234 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFRAP16234 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.69□□□□□ -1.34
PDGFRAP16234 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFRAP16234 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 AL359976.1-201ENST00000418655 3528 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC007114.2-201ENST00000576014 4281 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFRAP16234 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC022034.1-201ENST00000512867 2156 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 OFD1P17-201ENST00000437639 3018 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PDGFRAP16234 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 THEM7P-201ENST00000419556 672 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFRAP16234 LDHAP2-201ENST00000437325 985 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 AC009237.1-201ENST00000442127 744 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 COX4I1P2-201ENST00000447446 547 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 AC097359.1-201ENST00000447946 463 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFRAP16234 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFRAP16234 RNA5SP418-201ENST00000515951 117 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AP005639.1-201ENST00000526939 192 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 AC135983.3-201ENST00000528049 1226 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.68□□□□□ -1.34
PDGFRAP16234 MT1CP-201ENST00000567054 174 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC005828.7-201ENST00000607331 556 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 AL445649.1-201ENST00000615941 691 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 AL357153.4-201ENST00000620487 1016 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFRAP16234 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFRAP16234 AC119674.1-213ENST00000641177 1386 ntBASIC6.68□□□□□ -1.34
PDGFRAP16234 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PDGFRAP16234 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFRAP16234 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC011815.2-201ENST00000618230 2021 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PDGFRAP16234 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC090181.3-201ENST00000624777 1514 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC011369.2-201ENST00000624423 1567 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 RNA5SP77-201ENST00000365394 120 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 YWHAZP4-201ENST00000392459 708 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 PRELID1P1-201ENST00000403549 660 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 AL360013.1-201ENST00000419031 858 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 BMP6P1-201ENST00000431230 679 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC002075.1-201ENST00000457396 676 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 OR9A1P-202ENST00000484361 945 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 RN7SL568P-201ENST00000493069 298 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 AC117500.1-201ENST00000497352 755 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 RN7SKP183-201ENST00000517169 324 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.67□□□□□ -1.34
PDGFRAP16234 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.67□□□□□ -1.34
PDGFRAP16234 AC009779.8-202ENST00000607990 932 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 uc_338.29-201ENST00000615099 168 ntBASIC6.67□□□□□ -1.34
PDGFRAP16234 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDGFRAP16234 AP001885.1-201ENST00000621658 558 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms