Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 PSMD10P2-201ENST00000432890 672 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 AL020997.1-201ENST00000446554 349 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 RPL12P24-201ENST00000474907 486 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC091874.2-201ENST00000505889 720 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 HMGN1P16-201ENST00000508308 283 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC006512.2-201ENST00000543250 486 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 AL845552.1-201ENST00000556820 323 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 SNORA74.4-201ENST00000607595 199 ntBASIC5.93□□□□□ -1.46
HOXD4P09016 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD4P09016 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXD4P09016 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HOXD4P09016 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXD4P09016 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXD4P09016 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXD4P09016 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD4P09016 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 U3.52-201ENST00000384034 216 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXD4P09016 RBBP4P5-201ENST00000398583 1266 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 TRGV5P-201ENST00000419915 354 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AL451136.1-201ENST00000435399 325 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD4P09016 POU5F1P5-201ENST00000445059 658 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AC009963.4-201ENST00000448535 339 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 CYCSP25-201ENST00000525280 316 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 OR52K3P-201ENST00000531655 943 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 RPL41P2-201ENST00000544920 409 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AP000619.2-201ENST00000546014 969 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC026956.1-201ENST00000558741 396 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 RN7SL208P-201ENST00000577964 296 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC026898.1-201ENST00000586404 571 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC011497.2-201ENST00000600255 639 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD4P09016 uc_338.31-201ENST00000615595 186 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
HOXD4P09016 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD4P09016 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXD4P09016 AC087392.3-202ENST00000358446 1754 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
HOXD4P09016 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 XKRY2-202ENST00000623874 1581 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 XKRY-202ENST00000624960 1581 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXD4P09016 RPS2P45-201ENST00000469997 2057 ntBASIC5.92□□□□□ -1.46
HOXD4P09016 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
HOXD4P09016 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD4P09016 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXD4P09016 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXD4P09016 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD4P09016 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXD4P09016 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD4P09016 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD4P09016 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD4P09016 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXD4P09016 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXD4P09016 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms