Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 PSMA2P2-201ENST00000504319 686 ntBASIC6.86□□□□□ -1.31
RB1P06400 OR4D12P-201ENST00000509361 911 ntBASIC6.86□□□□□ -1.31
RB1P06400 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.86□□□□□ -1.31
RB1P06400 AC006499.4-201ENST00000510947 694 ntBASIC6.86□□□□□ -1.31
RB1P06400 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 AC027243.2-201ENST00000602530 724 ntBASIC6.86□□□□□ -1.31
RB1P06400 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.86□□□□□ -1.31
RB1P06400 AC004801.6-201ENST00000616571 978 ntBASIC6.86□□□□□ -1.31
RB1P06400 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.86□□□□□ -1.31
RB1P06400 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.86□□□□□ -1.31
RB1P06400 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.86□□□□□ -1.31
RB1P06400 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 AC093278.2-201ENST00000564956 2485 ntBASIC6.86□□□□□ -1.31
RB1P06400 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RB1P06400 CYP2G2P-201ENST00000594920 1485 ntBASIC6.85□□□□□ -1.31
RB1P06400 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 MIR130B-202ENST00000385018 82 ntBASIC6.85□□□□□ -1.31
RB1P06400 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RB1P06400 RNA5SP178-201ENST00000410380 128 ntBASIC6.85□□□□□ -1.31
RB1P06400 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.85□□□□□ -1.31
RB1P06400 AC079355.1-201ENST00000421770 223 ntBASIC6.85□□□□□ -1.31
RB1P06400 PSMC1P2-201ENST00000423961 1204 ntBASIC6.85□□□□□ -1.31
RB1P06400 NFYAP1-201ENST00000431953 972 ntBASIC6.85□□□□□ -1.31
RB1P06400 LYPLA1P1-201ENST00000434514 622 ntBASIC6.85□□□□□ -1.31
RB1P06400 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.85□□□□□ -1.31
RB1P06400 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.85□□□□□ -1.31
RB1P06400 RN7SL369P-201ENST00000477138 299 ntBASIC6.85□□□□□ -1.31
RB1P06400 AC091917.2-201ENST00000505002 744 ntBASIC6.85□□□□□ -1.31
RB1P06400 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 SNORD46.2-201ENST00000516021 102 ntBASIC6.85□□□□□ -1.31
RB1P06400 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 AP003396.4-201ENST00000527574 265 ntBASIC6.85□□□□□ -1.31
RB1P06400 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.85□□□□□ -1.31
RB1P06400 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.85□□□□□ -1.31
RB1P06400 AC025171.4-201ENST00000607250 1047 ntBASIC6.85□□□□□ -1.31
RB1P06400 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.85□□□□□ -1.31
RB1P06400 AC120057.5-201ENST00000623840 154 ntBASIC6.85□□□□□ -1.31
RB1P06400 AC069542.2-201ENST00000624816 216 ntBASIC6.85□□□□□ -1.31
RB1P06400 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.85□□□□□ -1.31
RB1P06400 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.85□□□□□ -1.31
RB1P06400 SPATA31C1-201ENST00000420021 3895 ntBASIC6.85□□□□□ -1.31
RB1P06400 AL589993.1-201ENST00000407450 2524 ntBASIC6.85□□□□□ -1.31
RB1P06400 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
RB1P06400 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
RB1P06400 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RB1P06400 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.84□□□□□ -1.31
RB1P06400 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
RB1P06400 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RB1P06400 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RB1P06400 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RB1P06400 RNA5SP284-201ENST00000384547 118 ntBASIC6.84□□□□□ -1.31
RB1P06400 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.84□□□□□ -1.31
RB1P06400 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.84□□□□□ -1.31
RB1P06400 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.84□□□□□ -1.31
RB1P06400 AL157884.1-201ENST00000424561 454 ntBASIC6.84□□□□□ -1.31
RB1P06400 AC130360.1-201ENST00000425489 1117 ntBASIC6.84□□□□□ -1.31
RB1P06400 Z68868.1-201ENST00000429048 544 ntBASIC6.84□□□□□ -1.31
RB1P06400 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms