Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 MIR6731-201ENST00000614863 72 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC026108.1-201ENST00000635444 547 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC004158.1-201ENST00000564508 4319 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC114774.1-201ENST00000507410 1770 ntBASIC4.72□□□□□ -1.65
HLA-DQA1P01909 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1P01909 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQA1P01909 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQA1P01909 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQA1P01909 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQA1P01909 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DQA1P01909 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RNU4-81P-201ENST00000363561 144 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RPS3AP5-201ENST00000389400 821 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RNA5SP474-201ENST00000391234 90 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC090114.1-201ENST00000393266 448 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC121334.1-201ENST00000396414 802 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RNA5SP177-201ENST00000410122 107 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 CLIC4P3-201ENST00000422221 752 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC134879.1-201ENST00000426062 394 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC007365.2-201ENST00000428806 458 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AL731534.1-201ENST00000434711 269 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RPL14P5-201ENST00000436474 730 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 NDUFB4P1-201ENST00000462398 381 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC022415.1-202ENST00000486612 523 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 TRBV5-2-201ENST00000489095 273 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC111000.6-201ENST00000514471 709 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 snoU109.5-201ENST00000516231 132 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC100854.1-201ENST00000520351 341 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 HNRNPCP8-201ENST00000528764 888 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC090241.1-201ENST00000587732 621 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 MIR132-201ENST00000591554 101 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC024085.1-201ENST00000604299 432 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC012511.1-201ENST00000608140 449 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AL356585.10-201ENST00000641883 123 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 RPS2P45-201ENST00000469997 2057 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AC023245.2-201ENST00000530760 2978 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DQA1P01909 AL136984.1-201ENST00000607611 1893 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 TUBBP10-201ENST00000427668 1301 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 QRSL1P3-201ENST00000552666 1316 ntBASIC4.71□□□□□ -1.66
HLA-DQA1P01909 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 GTF2IP4-201ENST00000453092 2054 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 U3.10-201ENST00000364459 214 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RN7SKP69-201ENST00000365390 305 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RNA5SP187-201ENST00000384400 119 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms