Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RPS7P14-201ENST00000426405 583 ntBASIC6.16□□□□□ -1.42
TNFP01375 PPIAP7-201ENST00000454070 489 ntBASIC6.16□□□□□ -1.42
TNFP01375 AC023194.2-201ENST00000465398 406 ntBASIC6.16□□□□□ -1.42
TNFP01375 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 AC090958.1-201ENST00000511122 351 ntBASIC6.16□□□□□ -1.42
TNFP01375 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 AP000620.1-201ENST00000527147 504 ntBASIC6.16□□□□□ -1.42
TNFP01375 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 AC009120.3-201ENST00000563335 499 ntBASIC6.16□□□□□ -1.42
TNFP01375 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.16□□□□□ -1.42
TNFP01375 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.16□□□□□ -1.42
TNFP01375 AC008507.3-201ENST00000585753 472 ntBASIC6.16□□□□□ -1.42
TNFP01375 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 RFPL4AP6-201ENST00000616792 846 ntBASIC6.16□□□□□ -1.42
TNFP01375 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.16□□□□□ -1.42
TNFP01375 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 AC006213.6-201ENST00000623722 4179 ntBASIC6.16□□□□□ -1.42
TNFP01375 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 AL591848.4-201ENST00000567832 3472 ntBASIC6.16□□□□□ -1.42
TNFP01375 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.16□□□□□ -1.42
TNFP01375 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 CUBNP3-201ENST00000457461 1784 ntBASIC6.16□□□□□ -1.42
TNFP01375 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TNFP01375 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.16□□□□□ -1.42
TNFP01375 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.15□□□□□ -1.42
TNFP01375 CYP2G2P-201ENST00000594920 1485 ntBASIC6.15□□□□□ -1.42
TNFP01375 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.15□□□□□ -1.42
TNFP01375 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.15□□□□□ -1.42
TNFP01375 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TNFP01375 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.15□□□□□ -1.42
TNFP01375 SNORA51.9-201ENST00000384295 124 ntBASIC6.15□□□□□ -1.42
TNFP01375 U3.43-201ENST00000410734 213 ntBASIC6.15□□□□□ -1.42
TNFP01375 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.15□□□□□ -1.42
TNFP01375 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.15□□□□□ -1.42
TNFP01375 AC130360.1-201ENST00000425489 1117 ntBASIC6.15□□□□□ -1.42
TNFP01375 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.15□□□□□ -1.42
TNFP01375 OR3D1P-201ENST00000438288 955 ntBASIC6.15□□□□□ -1.42
TNFP01375 AC094085.1-201ENST00000468914 584 ntBASIC6.15□□□□□ -1.42
TNFP01375 LSM3P4-201ENST00000502948 309 ntBASIC6.15□□□□□ -1.42
TNFP01375 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.15□□□□□ -1.42
TNFP01375 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.15□□□□□ -1.42
TNFP01375 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.15□□□□□ -1.42
TNFP01375 AC130365.2-201ENST00000525882 1201 ntBASIC6.15□□□□□ -1.42
TNFP01375 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.15□□□□□ -1.42
TNFP01375 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.15□□□□□ -1.42
TNFP01375 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.15□□□□□ -1.42
TNFP01375 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TNFP01375 AC090826.1-203ENST00000569235 490 ntBASIC6.15□□□□□ -1.42
TNFP01375 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.15□□□□□ -1.42
TNFP01375 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.15□□□□□ -1.42
TNFP01375 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.15□□□□□ -1.42
TNFP01375 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.15□□□□□ -1.43
TNFP01375 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.15□□□□□ -1.43
TNFP01375 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.15□□□□□ -1.43
TNFP01375 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
TNFP01375 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TNFP01375 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TNFP01375 AC092821.2-201ENST00000545710 2042 ntBASIC6.15□□□□□ -1.43
TNFP01375 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 RNU1-49P-201ENST00000363468 159 ntBASIC6.14□□□□□ -1.43
TNFP01375 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TNFP01375 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 ATP5LP2-201ENST00000440646 311 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC144530.1-201ENST00000452862 555 ntBASIC6.14□□□□□ -1.43
TNFP01375 PPIAP27-201ENST00000453800 265 ntBASIC6.14□□□□□ -1.43
TNFP01375 RANP2-201ENST00000456833 229 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms