Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 RPL41P2-201ENST00000544920 409 ntBASIC6.09□□□□□ -1.43
SNX3O60493 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.09□□□□□ -1.43
SNX3O60493 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.09□□□□□ -1.43
SNX3O60493 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.09□□□□□ -1.43
SNX3O60493 SNORD96A-201ENST00000606577 79 ntBASIC6.09□□□□□ -1.43
SNX3O60493 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 MIR7159-201ENST00000620587 66 ntBASIC6.09□□□□□ -1.43
SNX3O60493 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SNX3O60493 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX3O60493 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SNX3O60493 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.09□□□□□ -1.43
SNX3O60493 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNX3O60493 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SNX3O60493 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
SNX3O60493 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SNX3O60493 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SNX3O60493 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX3O60493 AC245036.1-201ENST00000391727 309 ntBASIC6.08□□□□□ -1.44
SNX3O60493 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SNX3O60493 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 RN7SKP281-201ENST00000410472 352 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC245096.1-201ENST00000413104 546 ntBASIC6.08□□□□□ -1.44
SNX3O60493 METTL15P3-201ENST00000415522 1221 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 NFYAP1-201ENST00000431953 972 ntBASIC6.08□□□□□ -1.44
SNX3O60493 NIP7P1-201ENST00000433227 512 ntBASIC6.08□□□□□ -1.44
SNX3O60493 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 AC068491.1-201ENST00000449539 1241 ntBASIC6.08□□□□□ -1.44
SNX3O60493 RANP2-201ENST00000456833 229 ntBASIC6.08□□□□□ -1.44
SNX3O60493 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 MRPL57P6-201ENST00000506570 309 ntBASIC6.08□□□□□ -1.44
SNX3O60493 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.08□□□□□ -1.44
SNX3O60493 AC090958.1-201ENST00000511122 351 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 TPM3P3-201ENST00000521343 354 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AP001646.2-201ENST00000528645 1156 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX3O60493 HIGD1AP9-201ENST00000550710 279 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX3O60493 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.08□□□□□ -1.44
SNX3O60493 MIR3689C-201ENST00000581239 72 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 CARSP1-201ENST00000603171 889 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC099777.1-201ENST00000603779 1070 ntBASIC6.08□□□□□ -1.44
SNX3O60493 DIMT1P1-201ENST00000603970 763 ntBASIC6.08□□□□□ -1.44
SNX3O60493 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 MIR6085-201ENST00000618314 110 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AC096708.4-201ENST00000620563 552 ntBASIC6.08□□□□□ -1.44
SNX3O60493 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 AC140479.4-205ENST00000636339 820 ntBASIC6.08□□□□□ -1.44
SNX3O60493 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 NCOA4P2-201ENST00000340589 1813 ntBASIC6.08□□□□□ -1.44
SNX3O60493 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SNX3O60493 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.08□□□□□ -1.44
SNX3O60493 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 AC004158.1-201ENST00000564508 4319 ntBASIC6.08□□□□□ -1.44
SNX3O60493 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNX3O60493 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNX3O60493 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX3O60493 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX3O60493 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 PTCD2P2-201ENST00000415579 1095 ntBASIC6.07□□□□□ -1.44
SNX3O60493 NME1P1-201ENST00000420914 382 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms