Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OR9A1P-202ENST00000484361 945 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC107958.1-201ENST00000556576 290 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC097467.4-201ENST00000605504 141 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AL021368.1-201ENST00000607490 540 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.47□□□□□ -1.37
SMAD6O43541 MIR6811-201ENST00000620409 58 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 OR7E91P-202ENST00000642062 1198 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
SMAD6O43541 AC125238.2-201ENST00000430003 1440 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SMAD6O43541 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.47□□□□□ -1.37
SMAD6O43541 AL136984.1-201ENST00000607611 1893 ntBASIC6.47□□□□□ -1.37
SMAD6O43541 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SMAD6O43541 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
SMAD6O43541 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.46□□□□□ -1.37
SMAD6O43541 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SMAD6O43541 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.46□□□□□ -1.37
SMAD6O43541 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SMAD6O43541 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SMAD6O43541 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.46□□□□□ -1.37
SMAD6O43541 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SMAD6O43541 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.46□□□□□ -1.37
SMAD6O43541 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SMAD6O43541 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.46□□□□□ -1.37
SMAD6O43541 AKAP17BP-201ENST00000431706 2719 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC011455.2-201ENST00000599320 3336 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 RNA5SP188-201ENST00000362916 129 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.46□□□□□ -1.38
SMAD6O43541 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC108479.1-201ENST00000431142 427 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AC112492.2-201ENST00000432774 1030 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.46□□□□□ -1.38
SMAD6O43541 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 CCNJP2-201ENST00000457810 1163 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 RN7SL643P-201ENST00000471845 291 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 RN7SL369P-201ENST00000477138 299 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
SMAD6O43541 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC091874.2-201ENST00000505889 720 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.46□□□□□ -1.38
SMAD6O43541 COX6B1P4-201ENST00000519826 484 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 IGHV4-55-201ENST00000520889 368 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AC022616.2-201ENST00000523185 300 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC122134.1-202ENST00000569111 1201 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.46□□□□□ -1.38
SMAD6O43541 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 SMIM12P1-201ENST00000603004 274 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AL008723.3-201ENST00000608926 449 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.46□□□□□ -1.38
SMAD6O43541 BNIP3P41-202ENST00000616656 861 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AL132640.3-201ENST00000630473 177 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.46□□□□□ -1.38
SMAD6O43541 AC008957.3-201ENST00000624112 2242 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 CCAT2-201ENST00000630920 1752 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 AC022905.1-201ENST00000503430 3048 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.46□□□□□ -1.38
SMAD6O43541 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 TMCC1P1-201ENST00000518897 1980 ntBASIC6.46□□□□□ -1.38
SMAD6O43541 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMAD6O43541 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.45□□□□□ -1.38
SMAD6O43541 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SMAD6O43541 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 AL157831.2-201ENST00000564681 3095 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 AL050335.1-201ENST00000396909 869 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 RBBP4P5-201ENST00000398583 1266 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 U3.43-201ENST00000410734 213 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AKR1B10P1-201ENST00000425765 942 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.45□□□□□ -1.38
SMAD6O43541 AL451063.1-201ENST00000450164 1133 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms