Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC037479.1-201ENST00000558361 625 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 MIR4732-201ENST00000581873 76 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC087269.2-201ENST00000641764 975 ntBASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAV27A0A087WT01 AKAP17BP-201ENST00000431706 2719 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 ARSFP1-201ENST00000398758 477 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 DHFRP2-201ENST00000414224 547 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 GPN3P1-201ENST00000423883 535 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 EMC3-AS1-205ENST00000438698 534 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AL034369.1-201ENST00000453808 477 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 MTCO1P55-201ENST00000489829 745 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC008945.1-201ENST00000505144 499 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 GLYATL1P2-202ENST00000588046 902 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC020916.2-201ENST00000591242 360 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 DYNLL1P1-201ENST00000595442 269 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AC068726.1-201ENST00000610993 341 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRAV27A0A087WT01 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 ZNF101P1-201ENST00000435701 1720 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AL133243.2-201ENST00000610331 1621 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RNU1-59P-201ENST00000364829 162 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AL121835.1-201ENST00000404250 354 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RN7SKP121-201ENST00000410842 305 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RPL23AP18-201ENST00000416139 468 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RPL21P50-201ENST00000417698 477 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC112492.2-201ENST00000432774 1030 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 PSMD8P1-201ENST00000436275 769 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC114728.1-201ENST00000488289 483 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms