Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AP003385.1-201ENST00000426387 893 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL26P34-201ENST00000431005 451 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC242426.1-201ENST00000435270 960 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 MTND4LP16-201ENST00000440828 295 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC016908.1-201ENST00000442571 1219 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL445686.1-201ENST00000443086 348 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC002366.1-201ENST00000446186 1190 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 MYADML-203ENST00000491596 951 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 OR5H5P-201ENST00000503164 928 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC122718.2-201ENST00000505325 591 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC078886.1-201ENST00000549144 554 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 BCAP31P2-201ENST00000563143 399 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 BCAP31P1-201ENST00000565437 385 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL154P-201ENST00000578043 324 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AP000860.1-201ENST00000605250 559 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL139123.1-201ENST00000612008 430 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL357080.1-201ENST00000617394 239 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AL109806.1-201ENST00000623967 1248 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 MTND1P37-201ENST00000636562 264 ntBASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PCDHGA11Q9Y5H2 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 Y_RNA.813-201ENST00000364639 102 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RNVU1-15-201ENST00000384476 165 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL17P50-201ENST00000396131 546 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC111200.2-201ENST00000418877 505 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 UBTFL3-201ENST00000418934 1024 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC114760.1-201ENST00000420310 652 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CDY14P-201ENST00000431260 1014 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC000111.3-201ENST00000433478 193 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL5P4-201ENST00000434805 886 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AL356498.1-201ENST00000443334 334 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC005840.2-201ENST00000447193 355 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CDY23P-201ENST00000451661 1014 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 PET100-201ENST00000456958 219 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL333P-201ENST00000476398 297 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SL28P-201ENST00000488836 298 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC098799.2-201ENST00000509466 868 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC087808.1-201ENST00000520501 361 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 SNRPCP14-201ENST00000524498 205 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms