Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 RNU1-84P-201ENST00000365447 164 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL353133.1-201ENST00000407695 401 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 MTND1P10-201ENST00000426108 832 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC092651.1-201ENST00000426110 312 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL138479.1-201ENST00000426913 484 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 RPL7AP30-201ENST00000482859 796 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC023310.2-201ENST00000553844 547 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 MIR378H-201ENST00000579966 83 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC100832.2-201ENST00000582080 776 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC005332.4-201ENST00000592752 579 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL353807.4-201ENST00000604995 257 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AC004890.3-201ENST00000605566 1095 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL138960.1-201ENST00000613838 513 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 OR7E91P-202ENST00000642062 1198 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 AL136984.1-201ENST00000607611 1893 ntBASIC5.91□□□□□ -1.46
VAPAQ9P0L0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VAPAQ9P0L0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 RNA5SP308-201ENST00000362532 115 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 RNU1-5P-201ENST00000362684 144 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL139135.1-201ENST00000412675 209 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL672212.1-201ENST00000422246 400 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL589794.1-201ENST00000424971 390 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL390879.1-201ENST00000439143 386 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC016908.1-201ENST00000442571 1219 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL356133.1-201ENST00000444762 372 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 RANP2-201ENST00000456833 229 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 RN7SL372P-201ENST00000461982 298 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 RN7SL714P-201ENST00000487050 298 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC008868.1-201ENST00000509786 737 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 CYP4F27P-201ENST00000514557 494 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC130366.1-201ENST00000526505 1192 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 OR6M2P-201ENST00000529831 871 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC023968.1-201ENST00000560719 475 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC020916.2-201ENST00000591242 360 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC012175.1-201ENST00000603755 531 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 AC069234.4-201ENST00000621276 412 ntBASIC5.9□□□□□ -1.46
VAPAQ9P0L0 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
VAPAQ9P0L0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.9□□□□□ -1.47
VAPAQ9P0L0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.9□□□□□ -1.47
VAPAQ9P0L0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VAPAQ9P0L0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VAPAQ9P0L0 AC114876.1-201ENST00000490962 1366 ntBASIC5.9□□□□□ -1.47
VAPAQ9P0L0 AC009220.2-201ENST00000489759 1751 ntBASIC5.9□□□□□ -1.47
VAPAQ9P0L0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VAPAQ9P0L0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VAPAQ9P0L0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms