Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 TMSB4XP4-201ENST00000323496 618 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 RNY3P10-201ENST00000384764 102 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 RNU6-932P-201ENST00000391108 106 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 RPL5P20-201ENST00000403848 896 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC003080.1-201ENST00000413552 767 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 RPL21P108-201ENST00000413857 481 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AL034379.1-201ENST00000423216 253 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC009784.1-201ENST00000426484 460 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 MTND3P1-201ENST00000441336 220 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC068042.1-201ENST00000482222 1148 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 OR11I1P-201ENST00000486033 954 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 KRT18P54-201ENST00000513396 748 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AP001646.2-201ENST00000528645 1156 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AP000619.3-201ENST00000535634 1127 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 NDUFA5P11-201ENST00000567995 343 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC096708.2-201ENST00000577676 512 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC093826.2-201ENST00000579042 108 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AL031429.2-201ENST00000602605 649 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 VDAC1P5-201ENST00000603132 844 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC013553.2-201ENST00000604244 589 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 NDUFB9P1-201ENST00000604683 510 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AP000860.1-201ENST00000605250 559 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC068276.1-201ENST00000605793 379 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC135068.5-201ENST00000624197 983 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC138305.3-201ENST00000624988 240 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 GOT2P1-201ENST00000440922 1309 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 MTCO1P18-201ENST00000455518 1419 ntBASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CUEDC1Q9NWM3 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.9□□□□□ -1.14
CUEDC1Q9NWM3 RNU6-500P-201ENST00000362349 107 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms