Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AL049840.5-201ENST00000602827 552 ntBASIC7.45□□□□□ -1.22
VTA1Q9NP79 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 MIR6861-201ENST00000618657 64 ntBASIC7.45□□□□□ -1.22
VTA1Q9NP79 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC018692.2-201ENST00000624130 348 ntBASIC7.45□□□□□ -1.22
VTA1Q9NP79 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC092821.2-201ENST00000545710 2042 ntBASIC7.45□□□□□ -1.22
VTA1Q9NP79 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VTA1Q9NP79 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC122713.2-201ENST00000624942 3335 ntBASIC7.45□□□□□ -1.22
VTA1Q9NP79 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
VTA1Q9NP79 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 IFIT1P1-201ENST00000400497 1449 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC034111.1-201ENST00000562143 3770 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 RPL11P4-201ENST00000332269 436 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC003045.1-201ENST00000398779 713 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 CCNB2P1-201ENST00000399411 1150 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL050305.1-201ENST00000399993 1230 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 OR7E156P-201ENST00000400303 464 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AMZ2P2-201ENST00000406819 1057 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 RPL21P50-201ENST00000417698 477 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC019205.1-201ENST00000421830 730 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 RCC2P2-201ENST00000422174 918 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 OR2L9P-201ENST00000444456 913 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 MTND2P25-201ENST00000449028 610 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC018635.1-201ENST00000468292 1030 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC119751.4-201ENST00000507498 357 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 DPPA3P2-201ENST00000553589 478 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL162632.2-201ENST00000553933 399 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC002310.3-201ENST00000569728 723 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 RN7SL208P-201ENST00000577964 296 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC120053.1-201ENST00000607706 736 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC016957.2-201ENST00000616998 848 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC005277.2-201ENST00000617898 390 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AL450226.2-201ENST00000622913 439 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC090772.4-201ENST00000623599 362 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC034229.6-201ENST00000623704 224 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 AC087565.3-202ENST00000642085 1603 ntBASIC7.44□□□□□ -1.22
VTA1Q9NP79 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VTA1Q9NP79 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
VTA1Q9NP79 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 RN7SKP15-201ENST00000364742 309 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 RPL5P20-201ENST00000403848 896 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC017035.1-201ENST00000411999 1115 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC108479.1-201ENST00000431142 427 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC007679.3-201ENST00000434035 414 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms