Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 MIR323B-201ENST00000385269 82 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AL353626.3-201ENST00000413399 657 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 HMGB1P7-201ENST00000450921 612 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 RPL12P30-201ENST00000488389 499 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 KHDC1P1-201ENST00000511053 508 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC114781.3-201ENST00000512083 142 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP340-201ENST00000517132 107 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 LINC00556-201ENST00000569603 412 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC092266.1-201ENST00000610958 165 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 OR7E91P-202ENST00000642062 1198 ntBASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KIAA1549Q9HCM3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC034229.2-201ENST00000566945 2508 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RN7SKP15-201ENST00000364742 309 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RPL23AP60-201ENST00000450011 454 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC006499.4-201ENST00000510947 694 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC023968.1-201ENST00000560719 475 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MRPS21P8-201ENST00000569196 235 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 SMG1P5-202ENST00000529428 4219 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 SMG1P2-201ENST00000566127 4221 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL359976.1-201ENST00000418655 3528 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP251-201ENST00000410614 137 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC009963.3-201ENST00000458090 486 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 RN7SL221P-201ENST00000466190 281 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 NATP-201ENST00000523491 878 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 NDUFA5P11-201ENST00000567995 343 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC027243.2-201ENST00000602530 724 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC067773.1-201ENST00000603284 1094 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC137695.1-201ENST00000604126 489 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AL450226.2-201ENST00000622913 439 ntBASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KIAA1549Q9HCM3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 MIR433-201ENST00000384837 93 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms