Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AL662874.1-201ENST00000426065 230 ntBASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AC245047.2-201ENST00000441060 530 ntBASIC5.86□□□□□ -1.47
CHD8Q9HCK8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 CYP4A44P-201ENST00000569984 154 ntBASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 OR7A1P-202ENST00000641542 1158 ntBASIC5.86□□□□□ -1.47
CHD8Q9HCK8 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 ERG-210ENST00000442448 5034 ntTSL 5 BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 AL049634.1-201ENST00000453770 1720 ntBASIC5.86□□□□□ -1.47
CHD8Q9HCK8 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHD8Q9HCK8 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 BRD7P2-201ENST00000466133 1944 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 U8.4-201ENST00000363626 134 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 SNORA62-201ENST00000365493 153 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC002553.3-201ENST00000453002 341 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PCNAP4-201ENST00000532690 730 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC091768.1-201ENST00000609258 930 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC136428.4-201ENST00000634254 1155 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 SAGE3P-201ENST00000619800 1635 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 MED28P4-201ENST00000433137 572 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC022206.1-201ENST00000495947 347 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 IGKV3D-31-201ENST00000519131 281 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 BRD9P1-201ENST00000529855 560 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC034105.4-201ENST00000568304 277 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AC022919.1-201ENST00000624979 626 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 AL161912.4-201ENST00000623889 2468 ntBASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHD8Q9HCK8 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 GAPDHP51-201ENST00000426454 1000 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 PA2G4P6-201ENST00000438325 1197 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AL353748.1-201ENST00000440753 474 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AL161747.1-201ENST00000480068 358 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 IGHVIII-67-3-201ENST00000517650 232 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AL121834.1-201ENST00000572284 509 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 FAM25E-202ENST00000608562 189 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AC131649.2-201ENST00000624925 4439 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 AC005839.1-201ENST00000624148 3213 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHD8Q9HCK8 MIR223-201ENST00000385204 110 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 RPL35AP3-201ENST00000414680 288 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 RPS7P14-201ENST00000426405 583 ntBASIC5.84□□□□□ -1.47
CHD8Q9HCK8 GEMIN2P1-201ENST00000454246 752 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms