Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 RN7SL393P-201ENST00000463588 296 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC093664.1-201ENST00000511779 289 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC115989.2-201ENST00000578640 563 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 SYPL1P2-201ENST00000582878 727 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC004805.3-201ENST00000603178 310 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AL008723.3-201ENST00000608926 449 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AL162377.2-201ENST00000624532 337 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AC005702.3-201ENST00000585345 1447 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 AP004289.1-201ENST00000436307 2205 ntBASIC6.57□□□□□ -1.36
PCDH9Q9HC56 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH9Q9HC56 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC217777.1-201ENST00000570034 1471 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 RNU6-316P-201ENST00000391027 107 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 RN7SKP221-201ENST00000410420 301 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AL139184.1-202ENST00000422303 222 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AL645939.3-201ENST00000435408 225 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 MRPS5P3-201ENST00000515577 166 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TRAV11-201ENST00000539512 339 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC133552.4-201ENST00000576103 676 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 MIR212-201ENST00000586026 110 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AL139041.1-201ENST00000605480 610 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC068726.1-201ENST00000610993 341 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 MIR6085-201ENST00000618314 110 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AL512356.3-201ENST00000623005 461 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 AC073365.1-203ENST00000641055 1992 ntBASIC6.56□□□□□ -1.36
PCDH9Q9HC56 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH9Q9HC56 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AOX3P-204ENST00000491025 2107 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RNU1-84P-201ENST00000365447 164 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RNU11-6P-201ENST00000391127 133 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 RPL23AP18-201ENST00000416139 468 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 TRGV5P-201ENST00000419915 354 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDH9Q9HC56 GAPDHP19-201ENST00000431768 1005 ntBASIC6.55□□□□□ -1.36
PCDH9Q9HC56 AC128677.1-201ENST00000436016 442 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms