Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 CUBNP3-201ENST00000457461 1784 ntBASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 MAPK10-357ENST00000641831 2858 ntBASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 AC090774.4-201ENST00000578888 1372 ntBASIC6.31□□□□□ -1.4
AMBRA1Q9C0C7 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL359263.1-201ENST00000441188 2796 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 RN7SKP55-201ENST00000364888 307 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 SNORA11.3-201ENST00000408471 128 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 GAPDHP69-201ENST00000425504 1008 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC134879.1-201ENST00000426062 394 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL139156.3-201ENST00000454802 394 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 SCDP1-201ENST00000455244 1081 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL354872.1-201ENST00000456361 967 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 RPL21P42-201ENST00000488408 464 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 CIR1P1-201ENST00000524055 1133 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 OR7E161P-201ENST00000533722 967 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL109628.1-201ENST00000556877 366 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC020914.7-201ENST00000594477 545 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ZNF92P2-201ENST00000600543 1059 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC007255.2-201ENST00000604053 631 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 U91328.4-201ENST00000608919 517 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 SNORA11.6-201ENST00000619030 128 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AP000484.1-201ENST00000620067 1252 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC007347.2-201ENST00000623044 180 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC087894.3-201ENST00000623682 349 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC073857.1-201ENST00000625082 1054 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL355480.1-201ENST00000629041 99 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC099654.9-201ENST00000637055 678 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 CAP1P2-201ENST00000417455 1409 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC110716.2-201ENST00000563865 3945 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 RACGAP1P-201ENST00000550663 1879 ntBASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.3□□□□□ -1.4
AMBRA1Q9C0C7 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RNA5SP114-201ENST00000363780 113 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MTND4LP21-201ENST00000415303 295 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms