Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AL096829.1-201ENST00000413677 457 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 OR8G3P-201ENST00000533406 921 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC079395.2-201ENST00000610982 737 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AL445670.1-201ENST00000618889 801 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC117409.1-201ENST00000470499 1310 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC025809.2-201ENST00000625085 1802 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC005839.1-201ENST00000624148 3213 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 HMGB1P20-201ENST00000402555 677 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 YWHAEP1-201ENST00000453697 763 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 MIR4776-2-201ENST00000580204 80 ntBASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SHANK3Q9BYB0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC104964.2-201ENST00000562242 4641 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 MIR433-201ENST00000384837 93 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AL133270.1-201ENST00000402635 279 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 RN7SKP125-201ENST00000410481 302 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 RPL36P18-201ENST00000419316 318 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 SEPT14P12-201ENST00000442280 560 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 RPS27AP3-201ENST00000453803 454 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC005244.1-201ENST00000582566 339 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC141002.1-201ENST00000607025 279 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 uc_338.26-201ENST00000612659 160 ntBASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SHANK3Q9BYB0 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 BX322650.1-201ENST00000332359 2143 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 PDZK1P1-202ENST00000425209 1350 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AP001541.1-201ENST00000623322 1904 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 RNU11-6P-201ENST00000391127 133 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 RPS15AP30-201ENST00000420976 390 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 SRSF1P1-201ENST00000424058 520 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 RPL35AP28-201ENST00000459730 331 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AC110056.1-201ENST00000525759 911 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AP002884.5-201ENST00000595053 1132 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 AF131215.2-201ENST00000531549 1710 ntBASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SHANK3Q9BYB0 TMEM75-201ENST00000624314 2165 ntBASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms