Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 RNA5SP485-201ENST00000365053 119 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 U3.52-201ENST00000384034 216 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 RAB5CP1-201ENST00000395972 580 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AL360013.1-201ENST00000419031 858 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC002127.1-201ENST00000421305 225 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC007064.3-201ENST00000422608 359 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 PCNPP2-201ENST00000441651 455 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 GAPDHP33-201ENST00000443168 1013 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC118758.1-202ENST00000454719 225 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ATG10-AS1-201ENST00000504846 648 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC122718.2-201ENST00000505325 591 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC011352.2-201ENST00000514574 1016 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 RN7SKP70-201ENST00000516655 271 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 OR9L1P-201ENST00000529493 933 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 OR4A42P-201ENST00000531397 938 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC092718.4-201ENST00000566639 716 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC245052.7-201ENST00000601161 359 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC063944.3-201ENST00000609969 533 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AC022507.1-201ENST00000548349 1505 ntBASIC7.25□□□□□ -1.25
PGBD4Q96DM1 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PGBD4Q96DM1 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 NCOA4P3-201ENST00000513203 1877 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 RPL24P4-201ENST00000326586 421 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 GCNT6-201ENST00000379591 934 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 MRPS6P2-201ENST00000381143 370 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 PSMA6P1-201ENST00000400275 741 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 PRELID1P1-201ENST00000403549 660 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 VN1R12P-201ENST00000403778 876 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AL139039.2-201ENST00000407436 479 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 RNU6-564P-201ENST00000410983 104 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 GABARAPL3-201ENST00000412799 354 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC093664.1-201ENST00000511779 289 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 MIR4271-201ENST00000582451 67 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 SYPL1P2-201ENST00000582878 727 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 PRELID3BP3-201ENST00000584963 545 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 uc_338.29-201ENST00000615099 168 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 AC010333.3-201ENST00000615100 402 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 MIR6806-201ENST00000622141 64 ntBASIC7.24□□□□□ -1.25
PGBD4Q96DM1 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.24□□□□□ -1.25
PGBD4Q96DM1 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms