Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 MIR640-201ENST00000385086 96 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 SDHDP6-201ENST00000414693 480 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 RPL35AP31-201ENST00000418340 337 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 DEFA9P-201ENST00000433042 285 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 TRIM60P16-201ENST00000444048 694 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 RPL36AP39-201ENST00000445859 318 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AL445466.1-201ENST00000448432 357 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 RN7SL269P-201ENST00000467795 305 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 SNORA58-201ENST00000505219 137 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC024451.1-201ENST00000508013 779 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC027229.1-201ENST00000583887 253 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 OR7A11P-201ENST00000597719 953 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC013731.1-201ENST00000604340 883 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 AL136131.3-201ENST00000607600 188 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.57□□□□□ -1.2
SNED1Q8TER0 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 AL133243.4-201ENST00000623116 3109 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC005332.9-201ENST00000620266 2921 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 RPS3AP2-201ENST00000407190 754 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 ZNF619P1-201ENST00000446539 752 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 COPS8P2-201ENST00000473228 627 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 AL356801.1-201ENST00000559320 294 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC090651.1-201ENST00000567865 634 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC104695.2-201ENST00000605056 775 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 MAPK10-365ENST00000641902 3825 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 RBPJP7-201ENST00000442803 1447 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 RBPJP5-201ENST00000449433 1447 ntBASIC7.56□□□□□ -1.2
SNED1Q8TER0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
SNED1Q8TER0 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SNED1Q8TER0 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 RNA5SP156-201ENST00000410250 110 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 DPPA2P3-201ENST00000411853 655 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC007394.1-201ENST00000421941 531 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 KIF4CP-201ENST00000422742 1279 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC127526.2-201ENST00000426436 775 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 GAPDHP23-201ENST00000444823 993 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC092824.1-201ENST00000483524 576 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 AC106800.3-201ENST00000511389 308 ntBASIC7.55□□□□□ -1.2
SNED1Q8TER0 SETP21-201ENST00000514799 892 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms